overview - Mar 09, 2015 2:36:4 AM
region pips - Mar 09, 2015 2:39:58 AM
pi in selection candidates - Mar 26, 2015 4:55:21 PM
parallelism in pi from empirical quantiles. - May 25, 2015 7:21:32 PM
dadi analysis with T. cristinae genomes - Jun 23, 2015 9:59:51 PM
abc from genome SNPs to infer migration rates - Jun 23, 2015 10:10:26 PM
demographic results - Jun 25, 2015 5:21:32 PM
code to show selection candidates - Jun 25, 2015 6:45:13 PM
fst for revised top pip SNPs - Jun 25, 2015 8:8:12 PM
ABC demographic inference with non cristinae populations - Jul 29, 2015 9:32:31 PM
MAF x Fst for 20 kb windows in T. cristinae - Jul 30, 2015 5:2:23 PM
additional ABC run for 10 population pairs - Aug 01, 2015 1:39:20 AM
re-running abc - Aug 04, 2015 8:29:30 PM
categorical distance mantel test for IBD within two non-cristinae species - Aug 05, 2015 4:20:59 PM
genetic architecture and Fst at the LG level - Aug 14, 2015 5:35:37 PM
re-ran and summarized Fst for trait-associated SNPs - Aug 18, 2015 4:23:0 PM
fst for dsr's in 10 population pairs - Oct 05, 2015 9:44:52 PM
fst between morphs for genome data - Oct 06, 2015 5:0:11 PM
problem with scaffold and locus ids for T. cristinae ecotype pairs on genome v0.3 - Oct 14, 2015 10:13:38 PM
re-doing cristinae analyses; new plan - Oct 19, 2015 4:28:33 PM
new T. cristinae analyses, estimating fst - Oct 20, 2015 2:42:28 AM
new fst plots with empirical quantiles and HMM - Oct 22, 2015 3:50:41 PM
new DSR analyses - Oct 23, 2015 9:54:18 PM
new trait-associated SNP analyses, ecotypes and experiments - Nov 01, 2015 11:47:39 PM
trait-associated SNP analyses based on HMM regions - Nov 08, 2015 4:59:14 PM
HMM model with N1 and FHA (Doro's populations) - Nov 08, 2015 5:38:24 PM
Permutation tests related to the inversion - Nov 21, 2015 5:53:24 AM
LD between vs. within morhps for high HMM regions - Nov 23, 2015 5:19:39 AM
recombination rate test with HMM defined region - Nov 23, 2015 5:45:9 AM
LD for striped vs. unstriped - Nov 23, 2015 10:17:27 PM
correlations in order of scaffolds between parents in large family - Nov 24, 2015 6:30:43 PM
cline in stripe frequency across a T. cristinae transect - Dec 01, 2015 11:14:53 PM
clines 1996 and 2001 combined - Dec 05, 2015 3:2:4 AM
Fst and HMM for 20 kb windows with Moe's GBS data - Mar 11, 2016 2:14:28 AM