Post date: Apr 07, 2020 1:43:30 PM
Which distances and clustering method to use?
When looking for spatial pattern in four slightly different datasets (less than 50 or less than 80% hets, binary or continuous), the results seemed very blurry and different from one metric to the other, from one dataset to the other.
The job is now to compare distances, compare filters, compare clustering methods to see if one may give robust results.
Good resource for dendograms in R: https://cran.r-project.org/web/packages/dendextend/vignettes/dendextend.html