Post date: Jun 12, 2014 10:28:3 PM
Here are genome-level annotations summaries:
N (missing data) = 56.06%
Non-N = 43.94%
genic = 16.12% (13,158 genes)
coding = 3.53% (62,064 CDS)
non-coding = 12.58%
2094 UTR's
62,157 exons
intergenic = 27.82%
Note, these do not sum to one, but that is because genic = coding + non-coding.
Median scaffold size: 9651 bp (2474 excluding N's).
718 scaffolds > 100 kb, 2 > 1 Mb.
Total genome length = 360,254,725 bp (158,297,813 without N's).
This information comes from/labs/evolution/data/lycaeides/melissa_genome/Annotation/genomeAnnotation.txt.