processing sequence data - Oct 22, 2013 6:2:57 PM
pca with melissa, admixture project populations only - Oct 22, 2013 7:36:3 PM
parsing sequence data from the selection experiment and additional melissa populations - Nov 05, 2013 5:12:18 PM
sequence assembly - Nov 07, 2013 5:28:6 PM
sequence alignment cont., summary, and compressing - Nov 08, 2013 11:44:13 PM
variant calling - Nov 09, 2013 11:1:19 PM
depth across all indiviudals and sites - Nov 09, 2013 11:3:14 PM
variant calling and vcf - Nov 11, 2013 5:52:49 PM
variant calling continued - Nov 12, 2013 5:34:41 PM
genotype estimation for rearing experiment individuals - Nov 12, 2013 9:42:14 PM
polygenic modeling of survival and adult weight with gemma - Nov 14, 2013 8:50:22 PM
polygenic modelling continued - Nov 15, 2013 8:54:0 PM
gemma analyses on dorc - Nov 15, 2013 9:51:9 PM
gemma analyses: multiple chains and combined data sets - Nov 19, 2013 10:8:2 PM
polygenic modelling, individual and combined experiments - Nov 20, 2013 9:50:16 PM
sparse effects from the polygenic models - Nov 20, 2013 11:2:12 PM
locus effects with combined sets - Nov 22, 2013 12:3:30 AM
pve in SLA on Ac is similar when using permuted phenotypes - Nov 22, 2013 4:49:8 PM
files rearranged - Nov 22, 2013 4:51:14 PM
probit model for survival - Nov 22, 2013 10:36:35 PM
preparing data for entropy analysis - Nov 23, 2013 12:13:52 AM
probit model - Nov 25, 2013 9:12:59 PM
entropy, population structure and genotypes for melissa - Nov 25, 2013 11:16:49 PM
entropy results, pca - Dec 03, 2013 3:31:46 PM
admixture proportion plot for melissa - Dec 03, 2013 10:17:30 PM
gemma results, survival with probit model - Dec 04, 2013 12:29:41 AM
gemma, probit posterior predictions - Dec 04, 2013 5:3:39 PM
perfromance genetics and genetic variation in GLA and SLA - Dec 06, 2013 8:50:45 PM
predicting survival, some cool results - Dec 11, 2013 7:7:45 PM
gemma posterior predictive family cross-validation - Dec 16, 2013 5:37:21 PM
breeding values for wild-caught individuals - Dec 17, 2013 12:9:56 AM
preparing data for wild breeding value estimation - Dec 17, 2013 8:13:56 PM
'survival breeding values' for wild-caught SLA and GLA - Jan 04, 2014 9:50:52 PM
prediction for cross-validation - Jan 04, 2014 10:21:39 PM
Bayesian regression for phenotypic data - Feb 25, 2014 4:6:11 PM
posterior cross-validation for adult weight - Feb 27, 2014 5:21:54 PM
posterior cross-validation for adulat weight, results - Mar 04, 2014 11:34:37 PM
family posterior cross-validation for adult weight - Mar 04, 2014 11:54:37 PM
SNP effect correlations - Apr 17, 2014 7:35:16 PM
cross-validation, area under the ROC curve - May 12, 2014 8:55:14 PM
cross-validation, combined experiments - May 13, 2014 2:15:36 AM
cross-validation, continued - May 23, 2014 9:44:3 PM
single snp linear mixed models - May 29, 2014 5:18:54 PM
genetic diversity and LD in the experimental popualtions - May 30, 2014 10:34:48 PM
annotations - May 31, 2014 9:40:56 PM
code for genetic diversity figure - Jun 03, 2014 11:56:5 PM
summaries of single locus linear model results - Jun 08, 2014 6:41:25 PM
genome annotations and tests for enrichment - Jun 10, 2014 2:55:34 PM
functional annotation for melissa genome top performance SNPs - Jun 12, 2014 10:43:12 PM
repititve elements for significant enrichemnts - Jun 13, 2014 4:44:29 PM
re-doing enrichment analyses - Dec 10, 2014 11:18:23 PM
running bayenv2 for Sam - Aug 12, 2015 9:10:3 PM
IBD/IBA for natural L. melissa populations - Mar 26, 2017 5:55:42 PM
DA to detect migrants in L. melissa - Mar 27, 2017 3:34:50 AM
BayAss to detect recent migration in L. melissa - Mar 27, 2017 5:28:45 PM
Contemporary Ne in L. melissa populations - Mar 27, 2017 8:41:50 PM
excess Z-linkage of top parallel BayPass SNPs - Mar 30, 2017 2:40:21 AM