#PC1
#This is a summary of all the SNPs in the analyses
#bart spread across 218 scaffolds
641 42
3745 50
3719 55
2685 62
1273 67
2065 70
2778 83
112 84
1908 110
1314 166
#cali 294 scaffolds
scaf numbins
641 89
3719 108
3745 129
2685 135
1273 155
2065 161
112 164
2778 168
1908 236
1314 425
#chum 228 scaffolds
scaf numbins
217 45
3719 48
2685 59
3745 63
1273 74
112 77
2065 77
2778 87
1908 95
1314 193
#cris 605 scaffolds
scaf numbins
641 206
217 209
2685 260
1273 272
2065 288
2778 299
3745 332
112 342
1908 488
1314 813
#knul 305 scaffolds
scaf numbins
702.2 91
3719 123
2685 141
3745 153
2065 173
1273 176
112 182
2778 194
1908 258
1314 460
#land 286 scaffolds
scaf numbins
217 89
3719 106
3745 125
2685 137
112 159
1273 159
2065 159
2778 163
1908 216
1314 422
#podu 252 scaffolds
scaf numbins
217 62
3719 65
1273 75
3745 76
2685 90
2065 105
2778 108
112 114
1908 144
1314 221
#popp 294 scaffolds
scaf numbins
641 85
3719 101
3745 113
2685 119
2065 120
1273 138
112 139
2778 163
1908 232
1314 388
### This is a summary for SNP bins in the top 0.9 quantile
bart = 67 unique scaffolds
cali = 118
chum = 73
cris = 320
knul = 117
land = 118
podu = 82
popp = 128
## top 10 scaffolds for high quantile snp bins
## bart
rownum scaf numbins
58 2778 5
59 641 6
60 2048 6
61 217 7
62 1319 7
63 2065 7
64 112 9
65 1908 9
66 2537 11
67 1314 12
## cali
rownum scaf numbins
109 2537 10
110 128 11
111 112 12
112 217 13
113 1908 13
114 2778 15
115 2065 17
116 3745 17
117 2685 20
118 1314 37
## chum
rownum scaf numbins
64 2685 5
65 3051 5
66 3745 5
67 217 6
68 1899 6
69 3719 6
70 2778 7
71 1273 10
72 1908 10
73 1314 17
## cris
rownum scaf numbins
311 2000 14
312 3719 16
313 996 17
314 3350 19
315 1314 20
316 128 21
317 699 23
318 1899 26
319 2537 36
320 1319 52
## land
rownum scaf numbins
109 641 9
110 2537 10
111 2778 10
112 1273 11
113 2065 11
114 3745 11
115 3719 13
116 2685 15
117 1908 22
118 1314 47
## knul
rownum scaf numbins
108 3745 11
109 1319 12
110 217 13
111 2065 13
112 2537 14
113 112 15
114 1273 19
115 2685 19
116 1908 27
117 1314 44
## podu
rownum scaf numbins
73 3350 6
74 3719 6
75 3745 6
76 112 7
77 217 7
78 2537 11
79 1273 15
80 1314 19
81 1319 19
82 1908 21
## popp
rownum scaf numbins
119 641 8
120 217 10
121 112 11
122 2685 11
123 3745 11
124 2065 12
125 3719 12
126 2778 18
127 1908 27
128 1314 36
### ################ pc2 #####################################################################
##This is a summary of all the SNPs in the analyses
#bart
rownum scaf numbins
209 641 42
210 3745 50
211 3719 55
212 2685 62
213 1273 67
214 2065 70
215 2778 83
216 112 84
217 1908 110
218 1314 166
#cali
rownum scaf numbins
285 641 89
286 3719 108
287 3745 129
288 2685 135
289 1273 155
290 2065 161
291 112 164
292 2778 168
293 1908 236
294 1314 425
#chum
rownum scaf numbins
219 217 45
220 3719 48
221 2685 59
222 3745 63
223 1273 74
224 112 77
225 2065 77
226 2778 87
227 1908 95
228 1314 193
#cris
rownum scaf numbins
596 641 206
597 217 209
598 2685 260
599 1273 272
600 2065 288
601 2778 299
602 3745 332
603 112 342
604 1908 488
605 1314 813
#knul
rownum scaf numbins
296 702.2 91
297 3719 123
298 2685 141
299 3745 153
300 2065 173
301 1273 176
302 112 182
303 2778 194
304 1908 258
305 1314 460
#land
rownum scaf numbins
277 217 89
278 3719 106
279 3745 125
280 2685 137
281 112 159
282 1273 159
283 2065 159
284 2778 163
285 1908 216
286 1314 422
#podu
rownum scaf numbins
243 217 62
244 3719 65
245 1273 75
246 3745 76
247 2685 90
248 2065 105
249 2778 108
250 112 114
251 1908 144
252 1314 221
#popp
rownum scaf numbins
285 641 85
286 3719 101
287 3745 113
288 2685 119
289 2065 120
290 1273 138
291 112 139
292 2778 163
293 1908 232
294 1314 388
### This is a summary for SNP bins in the top 0.9 quantile
bart = 74 unique scaffolds
cali = 96
chum = 67
cris = 277
knul = 114
land = 112
podu = 79
popp = 111
#bart
rownum scaf numbins
65 2778 4
66 2685 5
67 3745 5
68 641 6
69 3350 6
70 3719 6
71 217 7
72 112 8
73 1908 13
74 1314 16
#cali
rownum scaf numbins
87 3745 10
88 217 12
89 1319 12
90 2778 12
91 2537 14
92 2065 17
93 112 21
94 1908 23
95 2685 23
96 1314 46
#chum
rownum scaf numbins
58 699 5
59 1319 5
60 2537 5
61 3745 5
62 2065 6
63 217 7
64 1908 10
65 1273 11
66 2778 12
67 1314 20
#cris
rownum scaf numbins
268 2065 16
269 3350 18
270 128 19
271 3745 21
272 1899 22
273 1908 26
274 1314 31
275 699 36
276 2537 56
277 1319 64
#land
rownum scaf numbins
103 1319 11
104 2065 11
105 2537 11
106 2685 11
107 641 12
108 3719 12
109 112 14
110 2778 18
111 1908 20
112 1314 48
#knul
rownum scaf numbins
105 641 15
106 112 16
107 1273 17
108 2537 17
109 2778 17
110 3745 18
111 2065 19
112 2685 23
113 1908 28
114 1314 40
#podu
rownum scaf numbins
70 702.2 5
71 600 6
72 2778 6
73 3745 8
74 1319 12
75 112 14
76 1314 18
77 1273 19
78 2685 21
79 1908 29
#popp
rownum scaf numbins
102 2048 9
103 2065 9
104 2685 9
105 112 11
106 3719 13
107 1273 15
108 3745 15
109 2778 17
110 1908 18
111 1314 50
### ################ pc3 #####################################################################
#This is a summary of all the SNPs in the analyses
#bart
rownum scaf numbins
209 641 42
210 3745 50
211 3719 55
212 2685 62
213 1273 67
214 2065 70
215 2778 83
216 112 84
217 1908 110
218 1314 166
#cali
rownum scaf numbins
285 641 89
286 3719 108
287 3745 129
288 2685 135
289 1273 155
290 2065 161
291 112 164
292 2778 168
293 1908 236
294 1314 425
#chum
rownum scaf numbins
219 217 45
220 3719 48
221 2685 59
222 3745 63
223 1273 74
224 112 77
225 2065 77
226 2778 87
227 1908 95
228 1314 193
#cris
rownum scaf numbins
596 641 206
597 217 209
598 2685 260
599 1273 272
600 2065 288
601 2778 299
602 3745 332
603 112 342
604 1908 488
605 1314 813
#knul
rownum scaf numbins
296 702.2 91
297 3719 123
298 2685 141
299 3745 153
300 2065 173
301 1273 176
302 112 182
303 2778 194
304 1908 258
305 1314 460
#land
rownum scaf numbins
277 217 89
278 3719 106
279 3745 125
280 2685 137
281 112 159
282 1273 159
283 2065 159
284 2778 163
285 1908 216
286 1314 422
#podu
rownum scaf numbins
243 217 62
244 3719 65
245 1273 75
246 3745 76
247 2685 90
248 2065 105
249 2778 108
250 112 114
251 1908 144
252 1314 221
#popp
rownum scaf numbins
285 641 85
286 3719 101
287 3745 113
288 2685 119
289 2065 120
290 1273 138
291 112 139
292 2778 163
293 1908 232
294 1314 388
### This is a summary for SNP bins in the top 0.9 quantile
bart = 71 unique scaffolds
cali = 107
chum = 64
cris = 309
knul = 126
land = 109
podu = 77
popp = 100
#bart
rownum scaf numbins
62 2065 5
63 3051 5
64 3350 5
65 2048 6
66 2778 6
67 2537 7
68 641 8
69 1908 9
70 112 10
71 1314 13
#cali
rownum scaf numbins
98 2778 12
99 217 13
100 1908 13
101 1273 14
102 2065 14
103 3745 16
104 112 17
105 128 17
106 2685 24
107 1314 34
#chum
rownum scaf numbins
55 3745 5
56 217 6
57 1273 6
58 1319 6
59 699 7
60 3719 7
61 2778 8
62 1908 9
63 641 10
64 1314 25
#cris
rownum scaf numbins
300 2000 13
301 2864 13
302 2611 14
303 157 15
304 1899 16
305 3745 19
306 3719 22
307 2537 29
308 1314 31
309 1319 45
#land
rownum scaf numbins
100 1319 11
101 2537 11
102 112 13
103 2065 15
104 3745 15
105 2685 16
106 1273 17
107 2778 17
108 1908 20
109 1314 35
#knul
rownum scaf numbins
117 217 13
118 1319 14
119 1273 15
120 2685 15
121 3745 15
122 2778 16
123 112 18
124 1908 21
125 2065 21
126 1314 36
#podu
rownum scaf numbins
68 2537 5
69 3745 5
70 2778 6
71 3719 11
72 1314 13
73 112 15
74 1319 15
75 2685 19
76 1273 21
77 1908 25
#popp
rownum scaf numbins
91 2685 11
92 2778 11
93 2537 12
94 641 13
95 2065 13
96 1908 14
97 1082 15
98 1273 16
99 112 19
100 1314 39