Post date: Aug 28, 2020 8:40:28 PM
1 try running the chain script on my terminal
2 try installing the app in my home directory on the cluster
Does the .xml file run when only one chain?
Same issue!
/Applications/BEAST\ 2.6.2/bin/beast -threads 3 -overwrite -prefix chain$chain run6_testConvergence.xml - did not work
./beast -threads 3 -overwrite -prefix chain$chain /Users/rpineau/Documents/Year_2/Summer2020/Research/data/Pando/SNAPP/run6/run6_testConvergence.xml - did not work
Totally my fault if we lost time lately: I would not try the script in the terminal before sending a batch job/
Found the mistake!
It was in the -statefile chain$chain (I needed to specify the name)
run 7
[u6028866@kp029 run7]$ sbatch RunBeast.sh
Submitted batch job 8553116
run 8
[u6028866@kp029 run8]$ sbatch RunBeast.sh
Submitted batch job 8553113