samples from Frank in -80 - Oct 17, 2013 7:28:3 PM
additional samples and summary - Oct 29, 2013 3:43:32 PM
new samples - Dec 19, 2013 9:48:24 PM
callobruchus samples - Aug 22, 2014 11:8:26 PM
DNA extractions for the lentil, mung, and reversion lines - Aug 22, 2014 11:12:3 PM
GBS library prep - Aug 25, 2014 10:35:58 PM
working with sequence data, parse barcodes - Jan 09, 2015 5:50:4 PM
preparing data and genomes for alignment - Jan 23, 2015 12:12:19 AM
reference-based assembly - Jan 23, 2015 4:51:25 PM
compress and sort alignments - Jan 23, 2015 6:20:23 PM
variant calling - Jan 23, 2015 7:45:13 PM
variant filterning, genotype likelihoods - Jan 25, 2015 8:53:42 PM
allele frequency estimates - Jan 25, 2015 9:23:11 PM
nucelotide diversity - Feb 21, 2015 9:39:27 PM
new lentil line DNA extractions - Mar 05, 2015 12:0:26 AM
allele frequency change - Mar 24, 2015 11:5:27 PM
Ne estimates - Jun 15, 2015 10:31:19 PM
contemporary Ne in seed beetle lines, cont. - Jun 17, 2015 4:33:22 PM
seed beetle PCA - Jun 17, 2015 4:36:57 PM
More Ne estimates and plots - Jun 23, 2015 4:11:27 PM
initial test for genetic trade-offs between hosts - Jun 26, 2015 9:41:1 PM
Ne with ETPIs for L1, L2 and L3 - Sep 02, 2015 8:1:0 PM
re-run of exceptional allele frequency differences among lines - Sep 04, 2015 9:33:19 PM
ABC inference of selection - Sep 09, 2015 4:52:16 PM
additional abc runs - Sep 10, 2015 4:37:47 PM
summaries of selection estimates from abc - Sep 14, 2015 11:1:16 PM
recent change in reversion lines - Sep 18, 2015 8:56:58 PM
linkage disequilibrium - Sep 22, 2015 10:39:42 PM
additional abc runs for revision - Feb 16, 2016 9:11:57 PM
revised figure and anlysis for recent change in reversion lines - Feb 17, 2016 6:14:38 PM
results and summary for ABC with different priors - Feb 19, 2016 4:57:12 AM
genome assembly with allpaths-lg, second try - Mar 30, 2016 11:5:48 PM
annotation of C. maculatus genome - May 04, 2016 7:17:30 PM
additional notes on the C. maculatus Lucigen genome - Apr 18, 2018 10:6:28 PM