Post date: Aug 30, 2013 8:28:25 PM
I am analyzing the Timema full generation (mortality and reproduction and more mortality) experiment with bgsr. I am working with two different data sets, one with > 80k SNPs and a test data set with 10k SNPs. I have three chains running for each data set with a beta sd of 0.01 or 0.05 (prior on the strength of selection), and each of the three models (full, null and constrained; 30 mcmc jobs total with ids 7767-7796). Each chain is 15000 steps with a 5000 step burnin and thinning interval of 10. I submitted these to the long queue with a 2 week walltime. All of the jobs are currently running.