This is a test - Nov 04, 2019 8:32:43 PM
Getting familiar with .vcf file - Nov 06, 2019 12:4:46 AM
Useful links - Nov 06, 2019 9:42:24 PM
Visualization - PCA - Nov 11, 2019 6:16:5 PM
Visualization - PCA - 2 - Nov 12, 2019 6:40:41 PM
Visualize the data - PCA in R - Nov 12, 2019 8:40:44 PM
PCA - 3 - Nov 13, 2019 10:23:4 PM
Are the small and big trees clustering together? - Nov 15, 2019 3:42:59 AM
Are the small and big trees clustering together? - 2 - Nov 16, 2019 2:11:32 AM
Plot PC1 spatially - Nov 18, 2019 2:59:36 AM
Summary of the work from Oct 28th to Nov 21th - Nov 19, 2019 11:59:57 PM
Choosing the references for MuTect2 - Nov 20, 2019 4:2:25 PM
PC2 score map - Nov 26, 2019 7:6:50 PM
Downgrading gatk to try other mutect versions - Nov 29, 2019 8:16:54 PM
Last meeting with Zach - plan for the next steps - Nov 29, 2019 8:38:50 PM
2019-12-02 Filtering vcf files - Dec 02, 2019 10:17:11 PM
Labeling heterozygotes - Dec 04, 2019 12:6:37 AM
Labeling heterozygotes and finding a good threshold - Dec 04, 2019 11:34:40 PM
2019-12-04 - Dec 05, 2019 12:34:23 AM
2019-12-05 - - Dec 05, 2019 11:27:38 PM
2019-12-06 - - Dec 06, 2019 8:57:54 PM
2019-12-09 - Dec 10, 2019 2:55:43 AM
2019 -12-11 - Pando presentation at the lab meeting - Dec 12, 2019 8:39:0 PM
2020 - 01 - 13 - Jan 13, 2020 10:23:6 AM
Filter heterozygotes to keep SNPs with >80% hets - Jan 13, 2020 10:42:28 AM
2020 - 01 - 14 - Jan 14, 2020 12:49:31 PM
2020-01-15 - Jan 16, 2020 6:45:9 AM
2020-01-16 - Jan 16, 2020 10:43:35 AM
2020 - 01 - 21 - Jan 21, 2020 4:25:13 PM
2020 - 01 - 27 - Jan 27, 2020 9:56:21 AM
2020 - 01 - 28 - Jan 28, 2020 3:46:37 PM
2020 - 01 -29 - Jan 29, 2020 9:18:11 PM
2020 - 01 -30 - Jan 30, 2020 2:22:2 PM
2020 - 01 - 31 - Jan 31, 2020 12:44:7 PM
2020 - 02 - 03 - Feb 03, 2020 5:52:19 PM
2020 - 02 - 04 - Feb 04, 2020 4:35:0 PM
2020-02-10 - Feb 10, 2020 1:41:46 PM
2020-03-03 - Mar 03, 2020 11:7:24 PM
20200304 - Mar 04, 2020 3:3:9 PM
20200305 - Mar 05, 2020 7:58:59 PM
2020-03-08 - Mar 08, 2020 11:12:14 PM
2020-03-10 - Mar 10, 2020 2:48:15 PM
20200313 - Mar 13, 2020 10:15:19 PM
2020 - 03 -16 - Genetic distances - Mar 16, 2020 9:6:50 PM
2020 - 03 - 20 - Mar 20, 2020 6:11:7 PM
2020 - 03 - 30 - Mar 30, 2020 2:48:4 PM
2020 04 09 - Apr 07, 2020 1:43:30 PM
2020-04-21 - Apr 21, 2020 9:27:55 PM
2020-04-22 - Apr 22, 2020 1:18:58 PM
Thinking further - Apr 23, 2020 6:47:29 PM
2020-04-23 - Apr 23, 2020 6:55:21 PM
2020-04-29 - Apr 29, 2020 9:8:21 PM
2020 - 04 - 30 - Apr 30, 2020 9:40:46 PM
2020-05-01 - May 01, 2020 5:43:37 PM
2020-05-06 - May 07, 2020 11:17:51 AM
2020-05-11 - May 12, 2020 9:56:6 PM
2020-05-20 - May 21, 2020 9:40:51 PM
2020-05-22 - May 22, 2020 9:19:17 PM
2020-05-25 - May 26, 2020 2:0:44 PM
IBD in Pando - May 26, 2020 2:38:14 PM
Untitled - May 27, 2020 1:6:56 PM
IBD in Pando - Jun 04, 2020 10:12:33 PM