Zach's notes about Lycaeides de novo assemblies - Aug 30, 2013 8:3:44 PM
barcode file - Apr 25, 2017 8:37:34 PM
parsing barcodes - Apr 26, 2017 3:5:39 AM
UofU cluster - Apr 30, 2017 2:23:14 AM
split the parsed fastq file by individual - Apr 30, 2017 2:24:35 AM
assembly to genome - May 01, 2017 3:34:32 AM
more assemblies; sam to bam - May 02, 2017 4:0:17 AM
Variant calling - May 10, 2017 2:50:1 AM
Variant filtering - May 10, 2017 1:45:16 PM
entropy to estimate genotypes - May 12, 2017 3:42:23 AM
raw pheotype data - May 22, 2017 3:47:30 PM
morphoj 23v17 - May 22, 2017 4:22:16 PM
morphoj 24v17 - May 24, 2017 6:34:51 PM
residuals - May 25, 2017 3:2:17 AM
26v17. added more CSP wings to the dataset - May 26, 2017 9:48:26 PM
bayesian regression for residuals - May 29, 2017 2:30:35 AM
preparing some results for lab meeting 2 June - Jun 01, 2017 10:15:11 PM
PCA element size - Jun 05, 2017 2:56:42 PM
Megan will measure two more additional pops. - Jun 05, 2017 2:58:1 PM
NAs in the size dataset - Jun 06, 2017 6:56:17 PM
mapping: BSLMM for all inds - Jun 06, 2017 7:21:51 PM
BSLMM going well so far - Jun 07, 2017 5:17:6 PM
pheno correlations (size and position) heat map - Jun 08, 2017 2:44:20 AM
pca with size and position: all inds - Jun 08, 2017 3:30:55 AM
BSLMM for each subgroup - Jun 08, 2017 8:58:32 PM
BSLMM results: pve, pge, n_gemma - Jun 09, 2017 7:7:5 PM
BSLMM results: breeding values - Jun 10, 2017 3:40:27 AM
BSLMM results: pips and effect values - Jun 10, 2017 3:41:9 AM
scaffolds of interest - Jun 13, 2017 9:13:10 PM
# of QTL as a function of LG size - Jun 15, 2017 2:49:12 AM
which groups and traits have high pips for our scaffolds of interest? - Jun 15, 2017 2:52:45 AM
modularity: position, size, and breeding values - Jun 15, 2017 8:1:9 PM
wing pattern drawings - Aug 09, 2017 3:20:11 PM
BSLMM for each pop - Sep 07, 2017 2:46:23 AM
Population level: pheno corr - Sep 15, 2017 8:58:38 PM
ms - Sep 26, 2017 2:57:17 PM
correlation heat maps with breeding values - Sep 26, 2017 3:37:27 PM
PVE pop level - Sep 26, 2017 3:56:11 PM
finding other genes important to wing pattern - Sep 26, 2017 4:42:32 PM