Post date: Dec 20, 2017 7:59:53 PM
## pops
perl ../scripts/forkRunGemmaPrdt.pl ../infiles/GNP_mod_geno_size.txt o_*GNP*size*.param.txt
perl ../scripts/forkRunGemmaPrdt.pl ../infiles/GNP_mod_geno_coord.txt o_*GNP*coord*.param.txt
perl ../scripts/forkRunGemmaPrdt.pl ../infiles/SIN_mod_geno_size.txt o_*SIN*size*.param.txt
perl ../scripts/forkRunGemmaPrdt.pl ../infiles/SIN_mod_geno_coord.txt o_*SIN*coord*.param.txt
perl ../scripts/forkRunGemmaPrdt.pl ../infiles/YBG_mod_geno_size.txt o_*YBG*size*.param.txt
perl ../scripts/forkRunGemmaPrdt.pl ../infiles/YBG_mod_geno_coord.txt o_*YBG*coord*.param.txt
## estract breeding values run from the (renamed) output subdirectory
perl ../../scripts/getPrdtBvsPop.pl
## correlations for GNP size were 0.99 on average (mean and median), range = 0.977-0.999
## groups
perl ../scripts/forkRunGemmaPrdt.pl ../infiles/AN_mod_geno_size.txt o_*AN*size*.param.txt
## would take a bit, run a perl wrapper
perl wrap_forkRunGemmaPrdt.pl
## extract breeding values run from the (renamed) output subdirectory
perl ../../scripts/getPrdtBvsSub.pl
## all
perl ../scripts/forkRunGemmaPrdtAll.pl ../infiles/mod_geno_size.txt o_*size*param.txt
perl ../scripts/forkRunGemmaPrdtAll.pl ../infiles/mod_geno_coord.txt o_*coord*param.txt
perl ../../scripts/getPrdtBvsAll.pl