COVID-19 Progress

Hello! This is a new page to track the progress of the COVID-19 project.

If you need a meeting with Alec, please go to his calendar and schedule one. If the available times don't work for you, you can always message him on Slack.

If you are confused about the process we use for the COVID-19 Project, please see the MD Simulation page. If you need further explanation, you can see the Molecular Modeling page and subpages.

Teams:

Systems:

Mutants:

Runs:

When you're taking a simulation task, please put your name under the appropriate box. Once you've finished, upload your files to an appropriate place on the Google Drive, then come to this page. Open the sheet in another window to edit it, then add your name in the appropriate box and hyperlink your name to the file.

Note, please: If you're not confident you did something correctly, it is always fine (and recommended) to send it to me (Alec) before putting it on this page. That way, we don't waste simulation and work time on bad data. You can also check each other if some of you feel solid with your skills.

sace2-rbd — Soluble ACE2 (and mutants) with viral receptor binding domain

rg-rbd — Renzi-Ghersi decoy (and mutants) with viral receptor binding domain

sace2-free — Soluble ACE2 in solution

rg-free — Renzi-Ghersi decoy (and mutants) in solution

rbd-free — Viral receptor binding domain in solution