2020-04-01 APR

Current

Welcome onboard Brian

Recall github-centric development and communications,

Internal collaboration using MSTeams gaining traction.

UI/UX

Bhaumik has been converging towards a look-and-feel in Confluence. Let's find out what frameworks and design patterns work for him.

AI

Serverless AI with in browser delivery integration - https://imjoy.io

https://www.nature.com/articles/s41592-019-0627-0.epdf

https://www.thelancet.com/action/showPdf?pii=S1473-3099%2820%2930144-4


P2P data science learning at NCI

https://github.com/cbiit/p2p-datasci, more at the bottom

COVID19 Data Science and Engineering

This will be a special session to compare what each of us learned from COVID data resources. Please put you name below and the links you'll be using in your show-and-tell. What are we learning that informs the use of data resources like https://datascience.cancer.gov/data-commons, and how can we extend it to identify risk models for cancer treatment co-morbidity. Note broad consortium, https://ccc19us.org (have a look), soliciting patient data directly.

Jeya

http://covid19-r.herokuapp.com/

https://www.medrxiv.org/content/medrxiv/early/2020/03/20/2020.02.19.20025452.full.pdf

Nicole

https://www.ohdsi.org/covid-19-updates

Jonas

https://observablehq.com/@episphere/corona

https://observablehq.com/@episphere/nytcovid19

Martin Ferguson

https://covid19.healthdata.org/projections

http://www.healthdata.org/results/data-visualizations

Bhaumik

https://bhaumik55231.github.io/COVID-19/

Praful

Using epiPath to annotate and train a model over COVID-19 chest X-Ray images

https://www.kaggle.com/theroyakash/covid19

Sean

https://github.com/seandavi/sars2pack


Daniel

Ben

Upcoming CoVID-19 Hackathons!

Updates and more at https://biohackathons.github.io. If you have hackathon announcements, willing to give push access to known entities!