Journal Cub - 10:00-11:00

DeepVariant

Slides: https://www.dropbox.com/s/vs4d29msoxbb4u3/DCEG_talk_Sept_2021.pdf?dl=0

Hackathon - 9:30-10:00, 11:00-11:30

epiSphere's platforms,

Illustration below with a deArraying component

1- Connect

2- epiPath

3 - Data Platform (Confluence)

4 - Genomics.

5 - Epidemiological forecasting

Attributes

A - serverless API ecosystems.

B - starting with the roof.

C - user-facing, make room for user interaction as part of the computation.

deArraying

QuPath: https://www.nature.com/articles/s41598-017-17204-5

No portable implementation: https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-018-2111-8

What and how to develop it as a pluggable, interactive component in epiPath

Going JS or WebAssembly?

The answer has been mostly a failure of imagination ... 10 years ago...

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3424663

give it a try: https://imagejs.org

P2P backends

https://www.storj.io , how does the governance compare with, say, Box?