2024-02-07 FEB

Journal Club


Hackathon [Lee Mason]

Lee will be walking us, hands-on, slow, step-by-step, through OpenAI APIs, function calling + chaining, assistant modes etc. The purpose is to learn what the new platform offers. In addition to learning how to use LLMs, specifically, how can we functionalize them for epidemiology research applications (epiVerse)

Lee's notebook: https://observablehq.com/d/bf2deb02c5a87919 

Notes

Anyone ...

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Jonas

I'll be using the GC content calculation as an example in my own testing.

1) Fetch genome sequence
function description:  https://github.com/episphere/gpt/blob/main/functions/funFetchUCSC.json 
function code:  https://github.com/episphere/gpt/blob/main/functions/funFetchUCSC.js 

2) Calculate GC content
function description: https://github.com/episphere/gpt/blob/main/functions/funGCcontent.json  
function code: https://github.com/episphere/gpt/blob/main/functions/funGCcontent.js  

Anyone ...

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Miscelaneous

Using Azure and OpenAI with CBIIT managed tokens - update

epiVerse Layout

WebNN polyfill: https://github.com/webmachinelearning/webnn-polyfill