2022-06-06 JUL

Do mice play when the cat is away?

Quest QAQC.

Lorena developed JavaScript code that writes R code for QAQC.


QAQC

  1. R plumber: This is R's API package.

  2. Cloud Run: This is a GCP serverless product that runs docker containers. Since R is not a cloud native language, we need to wrap our plumber API in docker container.

  3. Cloud Build: This is a GCP serverless product that build the docker container. Automatically pulls the code from GitHub when it is updated, builds the docker container, and deploys the code.


Future work for Lorena: add additional API for biospecimen, which is slightly different. Ideally she would refactor runQAQC and call the same function, but until she has the time, she is considering the second API. We discussed how Confluence used her idea to perform QAQC.

No other topic

Meeting ended at 10:20.