Journal Club

Smart API -> FAIRest of them all?

paper: https://link.springer.com/chapter/10.1007/978-3-319-58451-5_11

Start here: https://smart-api.info

Example of usage: https://smart-api.info/ui/5a6bea1158d2652743c7a201fdb1c44d

example api query: https://smart-api.info/api/query?q=cancer&fields=info,_meta,_status,paths,tags,openapi,swagger&size=10&from=0

Hackathon

Melanoma Update

Me to Everyone

https://observablehq.com/@episphere/pgs

9:40 AMBalasubramanian, Jeya (NIH/NCI) [F] to Everyone

https://www.hgvs.org/mutnomen/recs.html

9:42 AMBalasubramanian, Jeya (NIH/NCI) [F] to Everyone

@Daniel: https://docs.gdc.cancer.gov/Data/File_Formats/MAF_Format/

9:46 AMBalasubramanian, Jeya (NIH/NCI) [F] to Everyone

https://docs.icgc.org/portal/api-endpoints/#/

9:52 AMBalasubramanian, Jeya (NIH/NCI) [F] to Everyone

http://csw.github.io/bioruby-maf/man/maf_index.1.html

10:13 AMRuss, Daniel (NIH/NCI) [E] to Everyone

@praful... you are right santa cruz

10:27 AMLee to Everyone

https://link.springer.com/chapter/10.1007/978-3-319-58451-5_11

10:28 AMBhawsar, Praphulla (NIH/NCI) [F] to Everyone

@Lee, this seems to be like the ModelZoo of Smart APIs: https://smart-api.info/registry

10:28 AMBhawsar, Praphulla (NIH/NCI) [F] to Everyone

There's a search option at the top there, along with tags for each API. Not sure if that's what you meant by discovery

10:29 AMBhawsar, Praphulla (NIH/NCI) [F] to Everyone

https://smart-api.info/api/query?q=asdf&fields=info,_meta,_status,paths,tags,openapi,swagger&size=10&from=0

11:00 AMMonjoy Saha to Everyone

https://histologyblog.com/2014/01/23/histoquarterly-superficial-spreading-malignant-melanoma/

11:01 AMBalasubramanian, Jeya (NIH/NCI) [F] to Everyone

https://www.tensorflow.org/api_docs/python/tf/gradients

...

Upcoming FAIR training - next weeks C4B

...

https://dceg-workshops.github.io