Mine ncol vs ncol
This software computes automatically the Maximal Information-based Nonparametric Exploration (MINE) association coefficient between all columns versus all columns. Computation is based on the package minerva. (see also MINE_col1_vs_others)
Detecting Novel Associations in Large Data Sets, David N. Reshef, et al., Science 334, 1518 (2011);
Manual :
1- if not already installed, install Perl free programming language
2- install R programming language.
3- install minerva
4- install GNU parallel (GNU Linux only)
5- unzip the software and edit "conf.txt" to tune CPU load
6- copy data tsv files in the “data” directory :
DATA in columns
- first line : columns names
- first column : row names
next columns are the values, with separator TAB.
9- execute the software by the command : perl parallel_Mine-0.1.pl
10- results are in the "results" directory