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Fred's Softwares
  • Home
  • Softwares
    • Add column category with filename
    • Aggregate rows
    • AutoCompare ZE
    • AutoCompare ZE cmdline
    • AutoCompare_SES
    • Batch Sequence
    • Benjamini Hochberg
    • BoxPlots
    • Check Study Compatibility
    • Check Table
    • CITE-seq-counter
    • Collapse microarray
    • Command line builder
    • Concatenate n tables
    • Copy Files in List
    • Correlation by columns
    • Correlation by lines
    • Correlation by lines in list
    • Correlation by lines in list Pearson Spearman
    • cosine similarity in list
    • cosine similarity parallel
    • Count dots in 2D plot
    • Create sublists according to numerical values
    • Databases
    • DeepTIL
    • Dot Chart
    • Duplicate rows by synonyms
    • ETD/CID inclusion list
    • Extract Columns
    • Extract Fasta in list
    • Extract Fasta in list parallel
    • Extract Fasta in list parallel GO
    • Extract sequences in chromosome
    • Fasta Cutter
    • Fasta file composition
    • Fasta Max length synonyms
    • Fasta Max length variants
    • Fasta_split_into_files
    • File Cleaner
    • Find Fasta max length
    • Find keyword in table
    • Find title line in table
    • FindPTM
    • G-quadruplex detector
    • GC content
    • Heat Map
    • Info files
    • Insert lines in files
    • Integration (AUC)
    • Interactive Scatter Plot
    • Jaccard Index
    • Linear Regression
    • LinePlots
    • Lines in One Column
    • Log2 transformation
    • Look inside file
    • Look inside table
    • Mean_by_factors
    • Merge col1 + col2
    • Merge Duplicates by rows
    • Merge Files Vertically
    • Merge n tables
    • Merge PDFs
    • Merge tables SQLite
    • Merge two tables
    • Mine ncol vs ncol
    • MINE_col1_vs_others
    • Motif Counter
    • Normality test
    • Normalize files means
    • Normalize tables
    • Normalize table by ISTD
    • nwCompare
      • nwCompare Bibliography
    • nwCompare - Julia
    • nwCompare - num
    • Parallel Files Processing
    • PepAlign
    • Peptide Filter
    • Process Tables
    • Protein Fold Change
    • PTM select
    • Pvalue and fold change calculation
    • Quantile normalization
    • Randomize tables by_rows
    • Randomize tables compiled
    • Rank Tables by cols
    • Remove columns
    • Remove columns by regexp
    • Remove comment lines
    • Remove duplicates
    • Remove empty lines
    • Remove header
    • Remove Lines
    • Remove lines by regexp
    • Rename columns append filename
    • Rename columns with filename
    • Rename files with list
    • Rename table with one colname
    • Reorganize genes synonyms
    • Replace cells in list
    • Replace first delimiter in tables
    • Replace strings in list
    • Replace words in list
    • Resize table
    • ROC combine
    • ROC curve
    • ROC curves merge
    • Scatter plot by cols interactive
    • search replace word
    • Select columns by regexp
    • Select columns in table
    • Select lines by sums
    • Select lines in table
    • Select lines by Regex in table Julia
    • Select most abundant peptides
    • Single-cell Multilayer Viewer
    • Single-Cell Signature Explorer
    • Single-Cell Virtual Cytometer
    • Skip lines in header
    • Skip lines until
    • Solve equation f(x)=0
    • Sort Columns
    • Sort Protein Groups
    • Split table by lines blocks
    • Split table columns
    • Split table into sub-tables
    • Split table lines
    • SVG to PNG
    • SwitchScan
    • t-SNE
    • Theil-Sen regression
    • Timer
    • Transpose tables
    • TSV to JSON
    • Two_columns_table
    • Vulcano plot
    • Wilkoxon and T-test
    • formation-2020
  • Tips - FAQ
    • Analyse microarrays with Fred's softwares
    • Compare tables
    • convert Mac or Win file into Unix
    • Create / Import csv files
    • Edit text files
    • How to clean text files
    • Install Julia Packages
    • Install Perl
    • Install Tk
    • Start a Julia software
    • How to compile a GO software
  • Cite
  • Licence
  • Publications
  • Contact me
  • About the author
Fred's Softwares
  • Home
  • Softwares
    • Add column category with filename
    • Aggregate rows
    • AutoCompare ZE
    • AutoCompare ZE cmdline
    • AutoCompare_SES
    • Batch Sequence
    • Benjamini Hochberg
    • BoxPlots
    • Check Study Compatibility
    • Check Table
    • CITE-seq-counter
    • Collapse microarray
    • Command line builder
    • Concatenate n tables
    • Copy Files in List
    • Correlation by columns
    • Correlation by lines
    • Correlation by lines in list
    • Correlation by lines in list Pearson Spearman
    • cosine similarity in list
    • cosine similarity parallel
    • Count dots in 2D plot
    • Create sublists according to numerical values
    • Databases
    • DeepTIL
    • Dot Chart
    • Duplicate rows by synonyms
    • ETD/CID inclusion list
    • Extract Columns
    • Extract Fasta in list
    • Extract Fasta in list parallel
    • Extract Fasta in list parallel GO
    • Extract sequences in chromosome
    • Fasta Cutter
    • Fasta file composition
    • Fasta Max length synonyms
    • Fasta Max length variants
    • Fasta_split_into_files
    • File Cleaner
    • Find Fasta max length
    • Find keyword in table
    • Find title line in table
    • FindPTM
    • G-quadruplex detector
    • GC content
    • Heat Map
    • Info files
    • Insert lines in files
    • Integration (AUC)
    • Interactive Scatter Plot
    • Jaccard Index
    • Linear Regression
    • LinePlots
    • Lines in One Column
    • Log2 transformation
    • Look inside file
    • Look inside table
    • Mean_by_factors
    • Merge col1 + col2
    • Merge Duplicates by rows
    • Merge Files Vertically
    • Merge n tables
    • Merge PDFs
    • Merge tables SQLite
    • Merge two tables
    • Mine ncol vs ncol
    • MINE_col1_vs_others
    • Motif Counter
    • Normality test
    • Normalize files means
    • Normalize tables
    • Normalize table by ISTD
    • nwCompare
      • nwCompare Bibliography
    • nwCompare - Julia
    • nwCompare - num
    • Parallel Files Processing
    • PepAlign
    • Peptide Filter
    • Process Tables
    • Protein Fold Change
    • PTM select
    • Pvalue and fold change calculation
    • Quantile normalization
    • Randomize tables by_rows
    • Randomize tables compiled
    • Rank Tables by cols
    • Remove columns
    • Remove columns by regexp
    • Remove comment lines
    • Remove duplicates
    • Remove empty lines
    • Remove header
    • Remove Lines
    • Remove lines by regexp
    • Rename columns append filename
    • Rename columns with filename
    • Rename files with list
    • Rename table with one colname
    • Reorganize genes synonyms
    • Replace cells in list
    • Replace first delimiter in tables
    • Replace strings in list
    • Replace words in list
    • Resize table
    • ROC combine
    • ROC curve
    • ROC curves merge
    • Scatter plot by cols interactive
    • search replace word
    • Select columns by regexp
    • Select columns in table
    • Select lines by sums
    • Select lines in table
    • Select lines by Regex in table Julia
    • Select most abundant peptides
    • Single-cell Multilayer Viewer
    • Single-Cell Signature Explorer
    • Single-Cell Virtual Cytometer
    • Skip lines in header
    • Skip lines until
    • Solve equation f(x)=0
    • Sort Columns
    • Sort Protein Groups
    • Split table by lines blocks
    • Split table columns
    • Split table into sub-tables
    • Split table lines
    • SVG to PNG
    • SwitchScan
    • t-SNE
    • Theil-Sen regression
    • Timer
    • Transpose tables
    • TSV to JSON
    • Two_columns_table
    • Vulcano plot
    • Wilkoxon and T-test
    • formation-2020
  • Tips - FAQ
    • Analyse microarrays with Fred's softwares
    • Compare tables
    • convert Mac or Win file into Unix
    • Create / Import csv files
    • Edit text files
    • How to clean text files
    • Install Julia Packages
    • Install Perl
    • Install Tk
    • Start a Julia software
    • How to compile a GO software
  • Cite
  • Licence
  • Publications
  • Contact me
  • About the author
  • More
    • Home
    • Softwares
      • Add column category with filename
      • Aggregate rows
      • AutoCompare ZE
      • AutoCompare ZE cmdline
      • AutoCompare_SES
      • Batch Sequence
      • Benjamini Hochberg
      • BoxPlots
      • Check Study Compatibility
      • Check Table
      • CITE-seq-counter
      • Collapse microarray
      • Command line builder
      • Concatenate n tables
      • Copy Files in List
      • Correlation by columns
      • Correlation by lines
      • Correlation by lines in list
      • Correlation by lines in list Pearson Spearman
      • cosine similarity in list
      • cosine similarity parallel
      • Count dots in 2D plot
      • Create sublists according to numerical values
      • Databases
      • DeepTIL
      • Dot Chart
      • Duplicate rows by synonyms
      • ETD/CID inclusion list
      • Extract Columns
      • Extract Fasta in list
      • Extract Fasta in list parallel
      • Extract Fasta in list parallel GO
      • Extract sequences in chromosome
      • Fasta Cutter
      • Fasta file composition
      • Fasta Max length synonyms
      • Fasta Max length variants
      • Fasta_split_into_files
      • File Cleaner
      • Find Fasta max length
      • Find keyword in table
      • Find title line in table
      • FindPTM
      • G-quadruplex detector
      • GC content
      • Heat Map
      • Info files
      • Insert lines in files
      • Integration (AUC)
      • Interactive Scatter Plot
      • Jaccard Index
      • Linear Regression
      • LinePlots
      • Lines in One Column
      • Log2 transformation
      • Look inside file
      • Look inside table
      • Mean_by_factors
      • Merge col1 + col2
      • Merge Duplicates by rows
      • Merge Files Vertically
      • Merge n tables
      • Merge PDFs
      • Merge tables SQLite
      • Merge two tables
      • Mine ncol vs ncol
      • MINE_col1_vs_others
      • Motif Counter
      • Normality test
      • Normalize files means
      • Normalize tables
      • Normalize table by ISTD
      • nwCompare
        • nwCompare Bibliography
      • nwCompare - Julia
      • nwCompare - num
      • Parallel Files Processing
      • PepAlign
      • Peptide Filter
      • Process Tables
      • Protein Fold Change
      • PTM select
      • Pvalue and fold change calculation
      • Quantile normalization
      • Randomize tables by_rows
      • Randomize tables compiled
      • Rank Tables by cols
      • Remove columns
      • Remove columns by regexp
      • Remove comment lines
      • Remove duplicates
      • Remove empty lines
      • Remove header
      • Remove Lines
      • Remove lines by regexp
      • Rename columns append filename
      • Rename columns with filename
      • Rename files with list
      • Rename table with one colname
      • Reorganize genes synonyms
      • Replace cells in list
      • Replace first delimiter in tables
      • Replace strings in list
      • Replace words in list
      • Resize table
      • ROC combine
      • ROC curve
      • ROC curves merge
      • Scatter plot by cols interactive
      • search replace word
      • Select columns by regexp
      • Select columns in table
      • Select lines by sums
      • Select lines in table
      • Select lines by Regex in table Julia
      • Select most abundant peptides
      • Single-cell Multilayer Viewer
      • Single-Cell Signature Explorer
      • Single-Cell Virtual Cytometer
      • Skip lines in header
      • Skip lines until
      • Solve equation f(x)=0
      • Sort Columns
      • Sort Protein Groups
      • Split table by lines blocks
      • Split table columns
      • Split table into sub-tables
      • Split table lines
      • SVG to PNG
      • SwitchScan
      • t-SNE
      • Theil-Sen regression
      • Timer
      • Transpose tables
      • TSV to JSON
      • Two_columns_table
      • Vulcano plot
      • Wilkoxon and T-test
      • formation-2020
    • Tips - FAQ
      • Analyse microarrays with Fred's softwares
      • Compare tables
      • convert Mac or Win file into Unix
      • Create / Import csv files
      • Edit text files
      • How to clean text files
      • Install Julia Packages
      • Install Perl
      • Install Tk
      • Start a Julia software
      • How to compile a GO software
    • Cite
    • Licence
    • Publications
    • Contact me
    • About the author

Welcome to Fred's Softwares

Thanks to Sylvie for the picture ;)

L'objectif de ce site est de partager des logiciels pour l'analyse de données et la manipulation de gros fichiers textes dans différents domaines tels que la protéomique, la métabolimique ou la transcriptomique.

The purpose of this site is to share softwares for data mining and large text files processing in proteomics, metabolomics, transcriptomics or any other field.

El propósito de este sitio es compartir programas para análisis de data y manipulación de grandes archivos de texto en varias esferas como la proteómica o la transcriptómica.

Целью этого сайта является обмен программного обеспечения для анализа данных и обработки больших текстовых файлов в различных областях, таких как протеомика или транскриптомика.

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