networks
compiled by Marco Pautasso (marco.pautasso(at)cefe.cnrs.fr),
for the CEFE discussion group on networks
May 2013
Bin Wu & Liyan Zhang (2013) Farmer innovation diffusion
via network building: a case of winter greenhouse diffusion in China.
Agriculture and Human Values, in press
http://dx.doi.org/10.1007/s10460-013-9438-6
Jeremy R. Goss & Graeme S. Cumming (2013) Networks of wildlife
translocations in developing countries: an emerging conservation issue?
Frontiers in Ecology an the Environment, in press
http://dx.doi.org/10.1890/120213
Benoît Geslin, Benoit Gauzens, Elisa Thébault & Isabelle Dajoz (2013)
Plant pollinator networks along a gradient of urbanisation.
PLoS One 8, 5: e63421
http://dx.doi.org/10.1371/journal.pone.0063421
Garry Robins (2013) A tutorial on methods for
the modeling and analysis of social network data.
Journal of Mathematical Psychology, in press
http://dx.doi.org/10.1016/j.jmp.2013.02.001
Apr 2013
Shahadat Uddin, Jafar Hamra & Liaquat Hossain (2013)
Mapping and modeling of physician collaboration network.
Statistics in Medicine, in press
http://dx.doi.org/10.1002/sim.5770
Didier A, Bardy L, Boulat E, Koenig J, Lapierre A,
Exbrayat F, Bordes J & Balfourier F (2012)
The PGR networks in France: collaboration of users
and the genetic resource centre on small grain cereals.
Russian Journal of Genetics: Applied Research 2, 4: 291-297
http://dx.doi.org/10.1134/S2079059712040053
Barbara J. Mills, Jeffery J. Clark, Matthew A. Peeples,
W. R. Haas, John M. Roberts, J. Brett Hill, Deborah L. Huntley,
Lewis Borck, Ronald L. Breiger, Aaron Clauset & M. Steven Shackley (2013)
Transformation of social networks in the late pre-Hispanic US Southwest.
PNAS, in press
http://dx.doi.org/10.1073/pnas.1219966110
Aurélie Albert, Tommaso Savini & Marie-Claude Huynen (2013)
The role of Macaca spp. (Primates: Cercopithecidae)
in seed dispersal networks. The Raffles Bulletin of Zoology 61, 1: 423-434
http://rmbr.nus.edu.sg/rbz/biblio/61/61rbz423-434.pdf
Mar 2013
Robert M. May (2013) Networks and webs in ecosystems and financial systems.
Philosophical Transactions of the Royal Society A 371: 20120376
http://dx.doi.org/10.1098/rsta.2012.0376
Brian B. Oakley, Cesar A. Morales, J. Line, Mark E. Berrang,
Richard J. Meinersmann, Glenn E. Tillman, Mark G. Wise,
Gregory R. Siragusa, Kelli L. Hiett & Bruce S. Seal (2013)
The poultry-associated microbiome: network analysis and
farm-to-fork characterizations.
PLoS One 8, 2: e57190
http://dx.doi.org/10.1371/journal.pone.0057190
Ruben H. Heleno, Jaime A. Ramos & Jane Memmott (2013)
Integration of exotic seeds into an Azorean seed dispersal network.
Biological Invasions, in press
http://dx.doi.org/10.1007/s10530-012-0357-z
Kirk Dombrowski, Bilal Khan, Joshua Moses, Emily Channell & Evan Misshula (2013)
Assessing respondent driven sampling for network studies in ethnographic contexts.
Advances in Anthropology 3, 1: 1-9
http://dx.doi.org/10.4236/aa.2013.31001
Feb 2013
Chad R. Wells, Eili Y. Klein & Chris T. Bauch (2013)
Policy resistance undermines superspreader
vaccination strategies for influenza.
PLOS Computational Biology 9, 3: e1002945
http://dx.doi.org/10.1371/journal.pcbi.1002945
Joaquín Goñi, Andrea Avena-Koenigsberger, Nieves Velez de Mendizabal,
Martijn P. van den Heuvel, Richard F. Betzel & Olaf Sporns (2013)
Exploring the morphospace of communication efficiency
in complex networks. PLoS One 8, 3: e58070
http://dx.doi.org/10.1371/journal.pone.0058070
Mario Konschake, Hartmut H.K. Lentz, Franz J. Conraths,
Philipp Hövel & Thomas Selhorst (2013) On the robustness of
in- and out-components in a temporal network.
PLoS One 8, 2: e55223
http://dx.doi.org/10.1371/journal.pone.0055223
Chessa A, Morescalchi A, Pammolli F, Penner O, Petersen AM & Riccaboni M (2013)
Is Europe evolving toward an integrated research area?
Science 339, 6120: 650-651
http://dx.doi.org/10.1126/science.1227970
Jan 2013
Eva M. Albert, Miguel A. Fortuna, José A. Godoy & Jordi Bascompte (2013)
Assessing the robustness of the networks of spatial genetic variation.
Ecology Letters, in press
http://dx.doi.org/10.1111/ele.12061
Qiang Fang & Shuang-Quan Huang (2013) A directed
network analysis of heterospecific pollen transfer
in a biodiverse community. Ecology, in press
http://dx.doi.org/10.1890/12-1634.1
Amin Mazloumian, Dirk Helbing, Sergi Lozano, Robert P. Light
& Katy Börner (2013) Global multi-level analysis of
the ‘scientific food web'.
Scientific Reports 3: 1167
http://dx.doi.org/10.1038/srep01167
Pablo Fleurquin, José J. Ramasco & Victor M. Eguiluz (2013)
Systemic delay propagation in the US airport network.
Scientific Reports 3: 1159
http://dx.doi.org/10.1038/srep01159
Dec 2012
Mateusz M. Pluciński, Calistus N. Ngonghala, Wayne M. Getz &
Matthew H. Bonds (2013) Clusters of poverty and disease emerge
from feedbacks on an epidemiological network.
Interface. 10: 20120656
http://dx.doi.org/10.1098/rsif.2012.0656
Raj Kumar Pan, Kimmo Kaski & Santo Fortunato (2012)
World citation and collaboration networks:
uncovering the role of geography in science.
Scientific Reports 2: 902
http://dx.doi.org/10.1038/srep00902
Pierpaolo Cavallo, Sergio Pagano, Giovanni Boccia,
Francesco De Caro, Mario De Santis & Mario Capunzo (2013)
Network analysis of drug prescriptions.
Pharmacoepidemiology and Drug Safety, in press
http://dx.doi.org/10.1002/pds.3384
Kyle Macdonald-Wallis, Russell Jago & Jonathan A.C. Sterne (2012)
Social network analysis of childhood and youth
physical activity: a systematic review.
American Journal of Preventive Medicine 43, 6: 636–642
http://dx.doi.org/10.1016/j.amepre.2012.08.021
Nov 2012
Tobias Heckmann & Wolfgang Schwanghart (2012)
Geomorphic coupling and sediment connectivity
in an alpine catchment — exploring sediment
cascades using graph theory.
Geomorphology, in press
http://dx.doi.org/10.1016/j.geomorph.2012.10.033
Pinior B, Platz U, Ahrens U, Petersen B,
Conraths F & Selhorst T (2012)
The German milky way: trade structure of the milk
industry and possible consequences of a food crisis.
Journal on Chain and Network Science 12, 1: 25-39
http://dx.doi.org/10.3920/JCNS2012.x001
Tom Brughmans (2012) Thinking through networks:
a review of formal network methods in archaeology.
Journal of Archaeological Method and Theory, in press
http://dx.doi.org/10.1007/s10816-012-9133-8
Johannes Illenberger & Gunnar Flötteröd (2012)
Estimating network properties from snowball sampled data.
Social Networks, in press
http://dx.doi.org/10.1016/j.socnet.2012.09.001
Oct 2012
Enrico Capobianco (2012) Dynamic networks in systems medicine.
Frontiers in Genetics 3: 185
http://dx.doi.org/10.3389/fgene.2012.00185
Nimalan Arinaminpathy, Sujit Kapadia & Robert M. May (2012)
Size and complexity in model financial systems.
PNAS, in press
http://dx.doi.org/10.1073/pnas.1213767109
Mark E. Laidre, Alex Lamb, Susanne Shultz & Megan Olsen (2012)
Making sense of information in noisy networks: human communication,
gossip, and distortion. Journal of Theoretical Biology, in press
http://dx.doi.org/10.1016/j.jtbi.2012.09.009
Rocío Castro-Urgal, Cristina Tur, Matthias Albrecht & Anna Traveset (2012)
How different link weights affect the structure of quantitative flower–
visitation networks. Basic and Applied Ecology, in press
http://dx.doi.org/10.1016/j.baae.2012.08.002
Sep 2012
Jean-François Dumasy, Christel Daniaux, Isabelle Donnay & Philippe V. Baret (2012)
Genetic diversity and networks of exchange:
a combined approach to assess intra-breed diversity.
Genetics Selection Evolution 44, 1: 17
http://dx.doi.org/10.1186/1297-9686-44-17
Jenny Lennartsson, Nina Håkansson, Uno Wennergren & Annie Jonsson (2012)
SpecNet: a spatial network algorithm that generates a wide range of specific structures.
PLoS One 7, 8: e42679
http://dx.doi.org/10.1371/journal.pone.0042679
Nicole Bohme Carnegie & Martina Morris (2012) Size matters:
concurrency and the epidemic potential of HIV in small networks.
PLoS One 7, 8: e43048
http://dx.doi.org/10.1371/journal.pone.0043048
Eiko Yoneki & Jon Crowcroft (2012) EpiMap: towards quantifying
contact networks for understanding epidemiology in developing countries.
Ad Hoc Networks, in press
http://dx.doi.org/10.1016/j.adhoc.2012.06.003
Aug 2012
Landon BE, Keating NL, Barnett ML, Onnela JP, Paul S, O'Malley AJ,
Keegan T & Christakis NA (2012) Variation in patient-sharing networks
of physicians across the United States.
JAMA 308, 3: 265-73
http://dx.doi.org/10.1001/jama.2012.7615
Steve Conway (2012) A cautionary note on data inputs
and visual outputs in social network analysis.
British Journal of Management, in press
http://dx.doi.org/10.1111/j.1467-8551.2012.00835.x
Stefano Battiston, Michelangelo Puliga, Rahul Kaushik, Paolo Tasca & Guido Caldarelli (2012)
DebtRank: too central to fail? Financial networks, the FED and systemic risk.
Scientific Reports 2: 541
http://dx.doi.org/10.1038/srep00541
Moritz Emanuel Beber, Christoph Fretter, Shubham Jain, Nikolaus Sonnenschein,
Matthias Müller-Hannemann & Marc-Thorsten Hütt (2012) Artefacts in statistical
analyses of network motifs: general framework and application to metabolic networks.
Interface, in press
http://dx.doi.org/10.1098/rsif.2012.0490
July 2012
Tammy M.K. Cheng, Sakshi Gulati, Rudi Agius & Paul A. Bates (2012)
Understanding cancer mechanisms through network dynamics.
Briefings in Functional Genomics, in press
http://dx.doi.org/10.1093/bfgp/els025
Benjamin Blonder, Tina W. Wey, Anna Dornhaus, Richard James & Andrew Sih (2012)
Temporal dynamics and network analysis.
Methods in Ecology & Evolution, in press
http://dx.doi.org/10.1111/j.2041-210X.2012.00236.x
Ilona R. Naujokaitis-Lewis, Yessica Rico, John Lovell,
Marie-Josée Fortin & Melanie A. Murphy (2012)
Implications of incomplete networks on estimation
of landscape genetic connectivity.
Conservation Genetics, in press
http://dx.doi.org/10.1007/s10592-012-0385-3
Thomas W. Valente (2012) Network interventions.
Science 337, 6090: 49-53
http://dx.doi.org/10.1126/science.1217330
Jun 2012
Joern Fischer, Euan G. Ritchie & Jan Hanspach (2012)
Academia's obsession with quantity.
Trends in Ecology & Evolution, in press
http://dx.doi.org/10.1016/j.tree.2012.05.010
Leon Danon, Thomas A. House, Jonathan M. Read & Matt J. Keeling (2012)
Social encounter networks: collective properties and disease transmission.
Interface, in press
http://dx.doi.org/10.1098/rsif.2012.0357
Ioannis Psorakis, Stephen J. Roberts, Iead Rezek & Ben C. Sheldon (2012)
Inferring social network structure in ecological systems from
spatio-temporal data streams. Interface, in press
http://dx.doi.org/10.1098/rsif.2012.0223
Mária Ercsey-Ravasz, Zoltán Toroczkai, Zoltán Lakner & József Baranyi (2012)
Complexity of the international agro-food trade network and
its impact on food safety. PLoS One 7, 5: e37810
http://dx.doi.org/10.1371/journal.pone.0037810
May 2012
Laurens Klerkx & Amy Proctor (2013) Beyond fragmentation and disconnect:
networks for knowledge exchange in the English land management advisory system.
Land Use Policy 30, 1: 13-24
http://dx.doi.org/10.1016/j.landusepol.2012.02.003
Camille Roth, Soong Moon Kang, Michael Batty & Marc Barthelemy (2012)
A long-time limit for world subway networks.
Interface, in press
http://dx.doi.org/10.1098/rsif.2012.0259
Béla Suki (2012) The major transitions
of life from a network perspective.
Frontiers in Physiology 3: 94
http://dx.doi.org/10.3389/fphys.2012.00094
David Levinson (2012) Network structure and city size.
PLoS One 7: e29721
http://dx.doi.org/10.1371/journal.pone.0029721
Apr 2012
Florian Ritter, Markus Fiebig & Andreas Muhar (2012)
Impacts of global warming on mountaineering: a classification
of phenomena affecting the alpine trail network.
Mountain Research and Development 32, 1: 4-15
http://dx.doi.org/10.1659/MRD-JOURNAL-D-11-00036.1
Rautureau S, Dufour B & Durand B (2012) Structural vulnerability of
the French swine industry trade network to the spread of infectious diseases.
Animal, in press
http://dx.doi.org/10.1017/S1751731111002631
Rodolphe Gonzalès & Lael Parrott (2012) Network theory in the
assessment of the sustainability of social–ecological systems.
Geography Compass, in press
http://dx.doi.org/10.1111/j.1749-8198.2011.00470.x
Maja M. Makagon, Brenda McCowan & Joy A. Mench (2012)
How can social network analysis contribute to social
behavior research in applied ethology?
Applied Animal Behaviour Science, in press
http://dx.doi.org/10.1016/j.applanim.2012.02.003
Mar 2012
Luca Dall’Asta, Matteo Marsili & Paolo Pin (2012)
Collaboration in social networks.
PNAS 109, 12: 4395-4400
http://dx.doi.org/10.1073/pnas.1105757109
Marcelo A. Aizen, Malena Sabatino & Jason M. Tylianakis (2012)
Specialization and rarity predict nonrandom loss of interactions
from mutualist networks. Science 335: 1486-1489
http://dx.doi.org/10.1126/science.1215320
Márcia Oliveira & João Gama (2012) An overview of social network analysis.
Wiley Interdisciplinary Reviews: Data Mining and Knowledge Discovery 3, 3: 99-115
http://dx.doi.org/10.1002/widm.1048
Lee Ann Rollins, Lucy E. Browning, Clare E. Holleley, James L. Savage,
Andrew F. Russell & Simon C. Griffiths (2012) Building genetic networks
using relatedness information: a novel approach for the estimation of
dispersal and characterization of group structure in social animals.
Molecular Ecology, in press
http://dx.doi.org/10.1111/j.1365-294X.2012.05492.x
Feb 2012
David M. P. Jacoby, Edward J. Brooks, Darren P. Croft & David W. Sims (2012)
Developing a deeper understanding of animal movements and spatial dynamics
through novel application of network analyses.
Methods in Ecology & Evolution, in press
http://dx.doi.org/10.1111/j.2041-210X.2012.00187.x
Jean-Christophe Foltête, Céline Clauzel, Gilles Vuidel & Pierline Tournant (2012)
Integrating graph-based connectivity metrics into species distribution models.
Landscape Ecology, in press
http://dx.doi.org/10.1007/s10980-012-9709-4
Eric Vander Wal, Paul C. Paquet & Jose A. Andres (2012)
Influence of landscape and social interactions on transmission
of disease in a social cervid.
Molecular Ecology, in press
http://dx.doi.org/10.1111/j.1365-294X.2011.05431.x
Sebastian Menke, Katrin Böhning-Gaese & Matthias Schleuning (2012)
Plant–frugivore networks are less specialized and more robust at
forest–farmland edges than in the interior of a tropical forest.
Oikos, in press
http://dx.doi.org/10.1111/j.1600-0706.2011.20210.x
Jan 2012
Coren L. Apicella, Frank W. Marlowe, James H. Fowler & Nicholas A. Christakis (2012)
Social networks and cooperation in hunter-gatherers.
Nature 481: 497–501
http://dx.doi.org/10.1038/nature10736
Winter Mason & Duncan J. Watts (2012)
Collaborative learning in networks.
PNAS, in press
http://dx.doi.org/10.1073/pnas.1110069108
Mark Broom & Bernhard Voelkl (2012) Two measures
of effective population size for graphs.
Evolution, in press
http://dx.doi.org/10.1111/j.1558-5646.2011.01528.x
Jonathan M. Levitt, Mike Thelwall & Charles Oppenheim (2011)
Variations between subjects in the extent to which the social
sciences have become more interdisciplinary.
Journal of the American Society for Information
Science and Technology 62, 6: 1118-1129
http://dx.doi.org/10.1002/asi.21539
Dec 2011
Sandra González-Bailón, Javier Borge-Holthoefer, Alejandro Rivero &
Yamir Moreno (2011) The dynamics of protest recruitment through an online network.
Scientific Reports 1: 197
http://dx.doi.org/10.1038/srep00197
Robert J. Fletcher, Miguel A. Acevedo, Brian E. Reichert, Kyle E. Pias &
Wiley M. Kitchens (2011) Social network models predict movement
and connectivity in ecological landscapes.
PNAS 108: 19282-19287
http://dx.doi.org/10.1073/pnas.1107549108
David G. Rand, Samuel Arbesman & Nicholas A. Christakis (2011)
Dynamic social networks promote cooperation in experiments with humans.
PNAS 108: 19193-19198
http://dx.doi.org/10.1073/pnas.1108243108
Gerrit Sander van Doorn & Michael Taborsky (2012)
The evolution of generalized reciprocity on
social interaction networks. Evolution, in press
http://dx.doi.org/10.1111/j.1558-5646.2011.01479.x
Nov 2011
Stephanie E. Hampton & John N. Parker (2011)
Collaboration and productivity in scientific synthesis.
BioScience 61, 11: 900-910
http://dx.doi.org/10.1525/bio.2011.61.11.9
Katri Korhonen, Teppo Hujala & Mikko Kurttila (2012)
Reaching forest owners through their social networks in timber sales.
Scandinavian Journal of Forest Research, in press
http://dx.doi.org/10.1080/02827581.2011.631935
John B. Horrigan (2011) What are the consequences
of being disconnected in a broadband-connected world?
Daedalus 140, 4: 17-31
http://dx.doi.org/10.1162/DAED_a_00112
Karsai M, Kivelae M, Pan RK, Kaski K, Kertesz J, Barabasi AL & Saramaeki J (2011)
Small but slow world: how network topology and burstiness slow down spreading.
Physical Review E 83: 025102
http://dx.doi.org/10.1103/PhysRevE.83.025102
Oct 2011
Luciano da Fontoura Costa, Osvaldo N. Oliveira, Gonzalo Travieso,
Francisco Aparecido Rodrigues, Paulino Ribeiro Villas Boas, Lucas Antiqueira,
Matheus Palhares Viana & Luis Enrique Correa Rocha (2011) Analyzing and
modeling real-world phenomena with complex networks: a survey of applications.
Advances in Physics 60, 3: 329-412
http://dx.doi.org/10.1080/00018732.2011.572452
Paola Zappa (2011) The network structure of knowledge sharing among physicians.
Quality & Quantity 45: 1109-1126
http://dx.doi.org/10.1007/s11135-011-9494-1
Giuseppe A. Micheli (2011) Two strong families in Southern Europe?
Re-examining the geography of kinship regimes stemming from the
reciprocity mechanisms between generations.
European Journal of Population, in press
http://dx.doi.org/10.1007/s10680-011-9245-y
Nicole Beckage, Linda Smith & Thomas Hills (2011) Small worlds
and semantic network growth in typical and late talkers.
PLoS One 6, 5: e19348
http://dx.doi.org/10.1371/journal.pone.0019348
Sep 2011
Amelia K. Scaffidi & Judith E. Berman (2011) A positive postdoctoral
experience is related to quality supervision and career mentoring,
collaborations, networking and a nurturing research environment.
Higher Education 62: 685-698
http://dx.doi.org/10.1007/s10734-011-9407-1
Sam Yeaman, Alana Schick & Laurent Lehmann (2011)
Social network architecture and the maintenance of
deleterious cultural traits. Interface, in press
http://dx.doi.org/10.1098/rsif.2011.0555
Marcella Corsi, Carlo D'Ippoliti & Federico Lucidi (2010)
Pluralism at risk? Heterodox economic approaches and the
evaluation of economic research in Italy.
American Journal of Economics and Sociology 69: 1495-1529
http://dx.doi.org/10.1111/j.1536-7150.2010.00754.x
Ben R. Martin (2011) The Research Excellence Framework and the
'impact agenda': are we creating a Frankenstein monster?
Research Evaluation 20, 3: 247-254
http://dx.doi.org/10.3152/095820211X13118583635693
Aug 2011
Diana Hicks & J. Sylvan Katz (2011)
Equity and excellence in research funding.
Minerva 49, 2: 137-151
http://dx.doi.org/10.1007/s11024-011-9170-6
Martin Nilsson Jacobi & Per R. Jonsson (2011)
Optimal networks of nature reserves can be found
through eigenvalue perturbation theory of the connectivity matrix.
Ecological Applications 21:1861–1870
http://dx.doi.org/10.1890/10-0915.1
François Guilhaumon, Boris R. Krasnov, Robert Poulin, Georgy I. Shenbrot & David Mouillot (2011)
Latitudinal mismatches between the components of mammal–flea interaction networks.
Global Ecology & Biogeography, in press
http://dx.doi.org/10.1111/j.1466-8238.2011.00714.x
Derzsi A, Derzsy N, Káptalan E & Néda Z (2011)
Topology of the Erasmus student mobility network.
Physica A: Statistical Mechanics and its Applications 390: 2601-2610