Research methods

• Network Pharmacology papers

Unraveling the treatment effects of huanglian jiedu decoction on drug-induced liver injury based on network pharmacology, molecular docking and experimental validation

Exploring the potential of Huangqin Tang in breast cancer treatment using network pharmacological analysis and experimental verification.

• Construction of protein-protein interaction (PPI) network/STRING database

Exploring the potential of Huangqin Tang in breast cancer treatment using network pharmacological analysis and experimental verification. [GeneCards database]

• Disease-related target genes identification

Exploring the potential of Huangqin Tang in breast cancer treatment using network pharmacological analysis and experimental verification. [GeneCards database]

• Kyoto Encyclopedia of Genes and Genome (KEGG) analysis

i. Unraveling the treatment effects of huanglian jiedu decoction on drug-induced liver injury based on network pharmacology, molecular docking and experimental validation

ii.  Widely targeted metabolomics reveals the phytoconstituent changes in Platostoma palustre leaves and stems at different growth stages

• Gene Ontology (GO) analysis/Enrichment analysis/pathway analysis

Unraveling the treatment effects of huanglian jiedu decoction on drug-induced liver injury based on network pharmacology, molecular docking and experimental validation

• Molecular docking

3D structures of targets were downloaded from the Alphafold database (https://alphafold.ebi.ac.uk/) 

Exploring the potential of Huangqin Tang in breast cancer treatment using network pharmacological analysis and experimental verification. [GeneCards database]

AutoDock Tools 1.5.7 was used for pre-processing of proteins and small molecules, including detection of torsional bonds. 

Exploring the potential of Huangqin Tang in breast cancer treatment using network pharmacological analysis and experimental verification. [GeneCards database]

Identification of potent inhibitors of HDAC2 from herbal products for the treatment of colon cancer: Molecular docking, molecular dynamics simulation, MM/GBSA calculations, DFT studies, and pharmacokinetic analysis

PyMOL software was used for analysis and mapping. 

Exploring the potential of Huangqin Tang in breast cancer treatment using network pharmacological analysis and experimental verification. [GeneCards database]

• Protein, antibody, epitope, immunogenecity studies

Relationship between protein conformational stability and its immunogenicity when administering antigens to mice using adjuvants—Analysis employed the CH2 domain in human antibodies.

• Adulteration and adulterants prevention program studies

Education Combined with Enforcement Reduces Lead-Contaminated Turmeric from 47% to 0% in Specific Markets in Bangladesh and India

Substitution of Boswellia serrata Extracts with Citric Acid in Bulk Shipments Originating in China

• Biological/animal models

• Anthelmintic/antiparasitic activity

An ethnopharmacological approach to evaluate antiparasitic and health-promoting abilities of Pueraria tuberosa (Willd.) DC. in livestock.

• Researches involving surveys

Assessment of satisfaction of attendees of healthcare centers in Jordan with community pharmacy services of pharmacies they usually use.

Associations of hypertension and antenatal care-seeking with perinatal mortality: A nested case-control study in rural Bangladesh.

• Market researches involving surveys

Industrial prospects on regulatory gaps and barriers in pharmaceutical exports and their counteraction: Local experiential with global implication.

• Researches involving occupational hazards and risks

Occupational hazards and risks among the women in fisher communities in Cox’s Bazar and Chattogram, Bangladesh.

• Researches involving pharmacological activity based on previous studies

The Clinical Research on Ginger (Zingiber officinale): Insights from ClinicalTrials.gov analysis.