Publications - 2023
Sean Maxwell, Mike Warfe, Hadrian Djohari, "dug: A Tool for Illuminating Disk Usage in HPC Environments", Practice and Experience in Advanced Research Computing, 2023, doi:10.1145/3569951.3597552.
Ammar Hoori, Tao Hu, Juhwan Lee, Sadeer Al-Kindi, Sanjay Rajagopalan, David L. Wilson, "Analysis of paracardial adipose tissues using deep learning segmentation in CT calcium score images", Medical Imaging 2023: Biomedical Applications in Molecular, Structural, and Functional Imaging, 2023, doi:10.1117/12.2653592.
Ammar Hoori, Tao Hu, Juhwan Lee, Sadeer Al-kindi, Sanjay Rajagopalan, David L. Wilson, "An enriched survival study of epicardial adipose tissues risk on major adverse cardiovascular event in CT calcium score images", Medical Imaging 2023: Biomedical Applications in Molecular, Structural, and Functional Imaging, 2023, doi:10.1117/12.2653613.
Mohamed ElKabbash, Nathaniel Hoffman, Andrew R. Lininger, Sohail A. Jalil, Theodore Letsou, Michael Hinczewski, Giuseppe Strangi, Chunlei Guo, "Fano resonant optical coatings platform for full gamut and high purity structural colors", Nat Commun, 2023, doi:10.1038/s41467-023-39602-2.
Thomas DeSilvio, Jacob T. Antunes, Kaustav Bera, Prathyush Chirra, Hoa Le, David Liska, Sharon L. Stein, Eric Marderstein, William Hall, Rajmohan Paspulati, Jayakrishna Gollamudi, Andrei S. Purysko, Satish E. Viswanath, "Region-specific deep learning models for accurate segmentation of rectal structures on post-chemoradiation T2w MRI: a multi-institutional, multi-reader study", Front. Med., 2023, doi:10.3389/fmed.2023.1149056.
Ozge N. Buyukcelik, Maryse Lapierre-Landry, Chaitanya Kolluru, Aniruddha R. Upadhye, Daniel P. Marshall, Nicole A. Pelot, Kip A. Ludwig, Kenneth J. Gustafson, David L. Wilson, Michael W. Jenkins, Andrew J. Shoffstall, "Deep-learning segmentation of fascicles from microCT of the human vagus nerve", Front. Neurosci., 2023, doi:10.3389/fnins.2023.1169187.
Justin N. Kim, Lia Gomez-Perez, Vladislav N. Zimin, Mohamed H. E. Makhlouf, Sadeer Al-Kindi, David L. Wilson, Juhwan Lee, "Pericoronary Adipose Tissue Radiomics from Coronary Computed Tomography Angiography Identifies Vulnerable Plaques", Bioengineering, 2023, doi:10.3390/bioengineering10030360.
Zehao Zhou, Fabio Della Sala, Shane M. Parker, "Minimal Auxiliary Basis Set Approach for the Electronic Excitation Spectra of Organic Molecules", J. Phys. Chem. Lett., 2023, doi:10.1021/acs.jpclett.2c03698.
Tariq Kewan, Arda Durmaz, Waled Bahaj, Carmelo Gurnari, Laila Terkawi, Hussein Awada, Olisaemeka D. Ogbue, Ramsha Ahmed, Simona Pagliuca, Hassan Awada, Yasuo Kutoba, Minako Mori, Ben Ponvilawan, Bayan Al-Share, Bhumika J. Patel, Hetty E. Carraway, Jacob Scott, Suresh K. Balasubramanian, Taha Bat, Yazan Madanat, Mikkael A. Sekeres, Torsten Haferlach, Valeria Visconte, Jaroslaw P. Maciejewski, "Molecular patterns identify distinct subclasses of myeloid neoplasia", Nat Commun, 2023, doi:10.1038/s41467-023-38515-4.
Timothy H. Ciesielski, Jacquelaine Bartlett, Sudha K. Iyengar, Scott M. Williams, "Hemizygosity can reveal variant pathogenicity on the X-chromosome", Hum Genet, 2022, doi:10.1007/s00439-022-02478-1.
Klichchupong Dabsamut, Adisak Boonchun, Walter R. L. Lambrecht, "Computational study of defect complexes in β-LiGaO2 and their relation to the donor–acceptor-pair recombination", Journal of Applied Physics, 2023, doi:10.1063/5.0146981.
Luis A. Ortiz-Rodríguez, Ye-Guang Fang, Germain Niogret, Kaivin Hadidi, Sean J. Hoehn, Heather J. Folkwein, Steffen Jockusch, Yitzhak Tor, Ganglong Cui, Liraz Levi, Carlos E. Crespo-Hernández, "Thieno[3,4-d]pyrimidin-4(3H)-thione: an effective, oxygenation independent, heavy-atom-free photosensitizer for cancer cells", Chem. Sci., 2023, doi:10.1039/D3SC02592F.
Jessica Walthew, Sarah Barack, Nishan M. Senanayake, Sarah J. Lavin, Hannah G. Dorris, Jennifer L.W. Carter, Ina T. Martin, "Imaging Analysis of Scratch Reduction in Poly (Methyl Methacrylate) (PMMA) Plastic with NOVUS Polishing Products", Studies in Conservation, 2023, doi:10.1080/00393630.2023.2173040.
Cameron A. Griffith, Sarah E. Krul, Sean J. Hoehn, Erqian Mao, Grace Sleyko, Carlos E. Crespo-Hernández, "Excited State Dynamics of Dibenzothiophene Derivatives", J. Phys. Chem. B, 2023, doi:10.1021/acs.jpcb.3c03037.
Sameera Nalin Venkat, Xuanji Yu, Jiqi Liu, Jakob Wegmueller, Jayvic Cristian Jimenez, Erika I. Barcelos, Hein Htet Aung, Xinjun Li, Jean-Nicolas Jaubert, Roger H. French, Laura S. Bruckman, "Statistical analysis and degradation pathway modeling of photovoltaic minimodules with varied packaging strategies", Front. Energy Res., 2023, doi:10.3389/fenrg.2023.1127796.
Yeyuan Li, Yasuhiro Kamotani, "Control-volume study of flow field in a two-phase cyclonic separator in microgravity", Theor. Comput. Fluid Dyn., 2022, doi:10.1007/s00162-022-00635-w.
Waled Bahaj, Tariq Kewan, Carmelo Gurnari, Arda Durmaz, Ben Ponvilawan, Ishani Pandit, Yasuo Kubota, Olisaemeka D. Ogbue, Misam Zawit, Yazan Madanat, Taha Bat, Suresh K. Balasubramanian, Hussein Awada, Ramsha Ahmed, Minako Mori, Manja Meggendorfer, Torsten Haferlach, Valeria Visconte, Jaroslaw P. Maciejewski, "Novel Scheme for Defining the Clinical Implications of TP53 Mutations in Myeloid Neoplasia", 2023, doi:10.21203/rs.3.rs-2656206/v1.
Juhwan Lee, Yazan Gharaibeh, Vladislav N. Zimin, Justin N. Kim, Issam Motairek, Neda S. Hassani, Luis A. P. Dallan, Gabriel T. R. Pereira, Mohamed H. E. Makhlouf, Ammar Hoori, Sadeer Al-Kindi, David L. Wilson, "Plaque characteristics derived from intravascular optical coherence tomography that predict major adverse cardiovascular events", 2023, doi:10.1101/2023.06.20.23291684.
Niloufar Dadkhah, Walter R. L. Lambrecht, Dimitar Pashov, Mark van Schilfgaarde, "Improved quasiparticle self-consistent electronic band structure and excitons in β−LiGaO2", Phys. Rev. B, 2023, doi:10.1103/PhysRevB.107.165201.
Ernest Chan, Penelope Benchek, Gabrielle Miller, Kim Brustoski, Ashleigh Schaffer, Barbara Truitt, Jessica Tag, Lisa Freebairn, Barbara Lewis, Sudha Iyengar, Catherine Stein, "Structural variation in families with speech and language disorder provides a deeper understanding of the genetic basis for naturally acquired speech", 2023, doi:10.21203/rs.3.rs-2972813/v1.
Jessica Abreu, Douglas C. Crowder, Robert F. Kirsch, "The Impact of Hill-Type Actuator Components on the Performance of Reinforcement Learning Controllers to Reverse Upper-Limb Paralysis", IEEE Trans. Neural Syst. Rehabil. Eng., 2023, doi:10.1109/TNSRE.2023.3285983.
Carlos Crespo-Hernández, Cameron A. Griffith, Sarah E. Krul, Sean J. Hoehn, Erqian Mao, Grace Sleyko, "Excited State Dynamics of Dibenzothiophene Derivatives", 2023, doi:10.26434/chemrxiv-2023-kwwr2.
Masayoshi Adachi, Sonoko Hamaya, Daisuke Morikawa, Benjamin G. Pierce, Ahmad M. Karimi, Yuji Yamagata, Kenji Tsuda, Roger H. French, Hiroyuki Fukuyama, "Temperature dependence of crystal growth behavior of AlN on Ni–Al using electromagnetic levitation and computer vision technique", Materials Science in Semiconductor Processing, 2023, doi:10.1016/j.mssp.2022.107167.
Arda Durmaz, Carmelo Gurnari, Courtney E. Hershberger, Simona Pagliuca, Noah Daniels, Hassan Awada, Hussein Awada, Vera Adema, Minako Mori, Ben Ponvilawan, Yasuo Kubota, Tariq Kewan, Waled S. Bahaj, John Barnard, Jacob Scott, Richard A. Padgett, Torsten Haferlach, Jaroslaw P. Maciejewski, Valeria Visconte, "A multimodal analysis of genomic and RNA splicing features in myeloid malignancies", iScience, 2023, doi:10.1016/j.isci.2023.106238.
A Bocchinfuso, D Calvetti, E Somersalo, "Estimation of the cell membrane permeability for gas transport from surface pH measurements", Inverse Problems, 2023, doi:10.1088/1361-6420/aceb86.
Naomi Joseph, Beth Ann Benetz, Prathyush Chirra, Harry Menegay, Silke Oellerich, Lamis Baydoun, Gerrit R. J. Melles, Jonathan H. Lass, David L. Wilson, "Machine Learning Analysis of Postkeratoplasty Endothelial Cell Images for the Prediction of Future Graft Rejection", Trans. Vis. Sci. Tech., 2023, doi:10.1167/tvst.12.2.22.
Jessica A. Scarborough, Steven A. Eschrich, Javier Torres-Roca, Andrew Dhawan, Jacob G. Scott, "Exploiting convergent phenotypes to derive a pan-cancer cisplatin response gene expression signature", npj Precis. Onc., 2023, doi:10.1038/s41698-023-00375-y.
Chen Weng, Anniya Gu, Shanshan Zhang, Leina Lu, Luxin Ke, Peidong Gao, Xiaoxiao Liu, Yuntong Wang, Peinan Hu, Dylan Plummer, Elise MacDonald, Saixian Zhang, Jiajia Xi, Sisi Lai, Konstantin Leskov, Kyle Yuan, Fulai Jin, Yan Li, "Single cell multiomic analysis reveals diabetes-associated β-cell heterogeneity driven by HNF1A", Nat Commun, 2023, doi:10.1038/s41467-023-41228-3.
M. Mehraeen, Pengtao Shen, Steven S.-L. Zhang, "Quantum unidirectional magnetoresistance", Phys. Rev. B, 2023, doi:10.1103/PhysRevB.108.014411.
Huay Din, Jesse Berezovsky, "Critical behavior and the Kibble-Zurek mechanism in a musical phase transition", PLoS ONE, 2023, doi:10.1371/journal.pone.0280227.
Raymond J. Wieser, Yu Wang, Andrew Fairbrother, Sophie Napoli, Adam W. Hauser, Scott Julien, Xiaohong Gu, Gregory S. O‘Brien, Kai-Tak Wan, Liang Ji, Michael D. Kempe, Kenneth P. Boyce, Laura S. Bruckman, "Field retrieved photovoltaic backsheet survey from diverse climate zones: Analysis of degradation patterns and phenomena", Solar Energy, 2023, doi:10.1016/j.solener.2023.04.061.
Brian Maxwell, Rémy Mével, Josué Melguizo-Gavilanes, "Spherically expanding flame simulations using Cantera coupled to an unsteady Lagrangian formulation", International Journal of Hydrogen Energy, 2023, doi:10.1016/j.ijhydene.2023.06.336.
Nicholas W. Barendregt, Peter J. Thomas, "Heteroclinic cycling and extinction in May–Leonard models with demographic stochasticity", J. Math. Biol., 2023, doi:10.1007/s00285-022-01859-4.
Grace Floring, Mohnish Peswani, Brian Maxwell, "On the role of transverse detonation waves in the re-establishment of attenuated detonations in methane–oxygen", Combustion and Flame, 2023, doi:10.1016/j.combustflame.2022.112497.