IMPORTANT: This is the legacy GATK documentation. This information is only valid until Dec 31st 2019. For latest documentation and forum click
here
created by Tiffany_at_Broad
on 2017-12-14
Open Access data comprises public data that you can access in FireCloud and the TCGA Data Portal without prior authorization. All FireCloud users can view Open Access TCGA data in FireCloud’s pre-populated TCGA Open Access Data workspaces.
Examples of TCGA Open Access Data
- De-identified clinical and demographic data
- Gene expression data
- Copy number alterations in regions of the genome
- Epigenetic data
- Summaries of data compiled across individuals
- Anonymized single amplicon DNA sequence data