124. Away workshop Gent 2015 Dec 8 Variant discovery in RNAseq with GATK

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created by Geraldine_VdAuwera

on 2015-12-08

The hands-on tutorial files and presentations slides from the Dec 8, 2015 workshop at VIB in Gent, Belgium are available at this link:

https://drive.google.com/folderview?id=0BwTg3aXzGxEDb2hTWERNWHg3c2M

Updated on 2015-12-09

From cenny on 2016-11-10

This tutorial is very useful. Thank you very much!

Is this the only workshop on RNA-seq? Is there other?

Is there a hands-on tutorial on ASEReadCounter?

From Geraldine_VdAuwera on 2016-11-21

Hi @cenny, thanks for your kind words! That’s the only RNA-seq specific tutorial we’ve done, I’m afraid. We haven’t done anything with ASEReadCounter. If there is interest in the community we can try to put it on our todo for later, but at the moment we haven’t seen sufficient levels of interest to justify prioritizing it.