created by Geraldine_VdAuwera
on 2012-11-06
If you encounter a broken link, please report it here.
To help us fix it, please tell us what is the link and what page you found it on.
Thank you!
official, broken-links
From jjmmii on 2012-11-11
Hi,
I found this broken link
http://www.broadinstitute.org/gatk/guide/workflows#variant_quality_score_recalibration
on this page
http://www.broadinstitute.org/gatk/guide/article?id=1268
From jjmmii on 2012-11-11
I think the correct link should be this one http://gatkforums.broadinstitute.org/discussion/39/variant-quality-score-recalibration
From h_manoj on 2012-11-11
Hi, I wanted to get more information about the DepthOfCoverage walker — the link http://www.broadinstitute.org/gatk/gatkdocs/org_broadinstitute_sting_gatk_walkers_coverage_DepthOfCoverage.html is broken. Is there an alternate link with the details?
From Geraldine_VdAuwera on 2012-11-12
@jjmmii, thanks for the report. The link has been fixed.
@h_manoj, thanks, we’re aware of this broken link. There is currently no alternate for that content, but you can find key information to use the tool [here](http://www.broadinstitute.org/gatk/guide/article?id=40) and [here](https://github.com/broadgsa/gatk/blob/master/public/java/src/org/broadinstitute/sting/gatk/walkers/coverage/DepthOfCoverage.java).
From dickinsw on 2012-12-26
Is the ftp server running? (ftp.broadinstitute.org) Trying to download GATK lite; request times out, unable to ping server.
Regards
From Geraldine_VdAuwera on 2013-01-02
Sorry to get back to you so late, @dickinsw, I was in holiday-induced hibernation.
We’ve had a few minor hiccups in server performance; should be all better now, but let us know if you experience any further problems.