Search this site
Skip to main content
Skip to navigation
Papaleo Research Group
Home
Bioinformatic Support
CBL pictures
CBL-movies
Emmanuelle Bignon
Open Positions
Our publications
A (dis)similarity index to compare correlated motions in molecular simulations
A combined computational and structural model of the full-length human prolactin receptor
A comparative study of Whi5 and retinoblastoma proteins: from sequence and structure analysis to intracellular networks
A two-step protein quality control pathway for a misfolded DJ-1 variant in fission yeast.
Absence of Neurofibromin Induces an Oncogenic Metabolic Switch via Mitochondrial ERK-Mediated Phosphorylation of the Chaperone TRAP1.
An acidic loop and cognate phosphorylation sites define a molecular switch that modulates ubiquitin charging activity in Cdc34-like enzymes
C-Terminal acidic domain of ubiquitin-conjugating enzymes: a multi-functional conserved intrinsically disordered domain in family 3 of E2 enzymes
Communication routes in ARID domains between distal residues in helix 5 and the DNA-binding loops
Compaction properties of an intrinsically disordered protein: Sic1 and its kinase-inhibitor domain
Comparing molecular dynamics force fields in the essential subspace.
Cytokine profiling of tumour interstitial fluid of the breast and its relationship with lymphocyte infiltration and clinicopathological characteristics
Cytokine profiling of tumour interstitial fluid of the breast and its relationship with lymphocyte infiltration and clinicopathological characteristics
DNA-binding protects p53 from interactions with cofactors involved in transcription-independent functions.
E2 superfamily of ubiquitin-conjugating enzymes: constitutively active or activated through phosphorylation in the catalytic cleft
ENCORE: Software for Quantitative Ensemble Comparison
Free-energy landscape, principal component analysis, and structural clustering to identify representative conformations from molecular dynamics simulations: the myoglobin case
Inhibitors of the Cdc34 acidic loop: A computational investigation integrating molecular dynamics, virtual screening and docking approaches
Integrating atomistic molecular dynamics simulations, experiments, and network analysis to study protein dynamics: strength in unity
Intramolecular interactions stabilizing compact conformations of the intrinsically disordered kinase-inhibitor domain of Sic1: a molecular dynamics investigation
Loop 7 of E2 enzymes: an ancestral conserved functional motif involved in the E2-mediated steps of the ubiquitination cascade
Mapping transiently formed and sparsely populated conformations on a complex energy landscape.
MIR7-3HG, a MYC-dependent modulator of cell proliferation, inhibits autophagy by a regulatory loop involving AMBRA1.
Molecular and structural insight into lysine selection on substrate and ubiquitin lysine 48 by the ubiquitin-conjugating enzyme Cdc34
Molecular dynamics simulation of chemokine receptors in lipid bilayer: a case study on C-C chemokine receptor type 2
Paths of long-range communication in the E2 enzymes of family 3: a molecular dynamics investigation
PyInteraph: a framework for the analysis of interaction networks in structural ensembles of proteins
The conformational ensemble of the disordered and aggregation-protective 182-291 region of ataxin-3
The human Na(+)/H(+) exchanger 1 is a membrane scaffold protein for extracellular signal-regulated kinase 2.
The mutational landscape of the oncogenic MZF1 SCAN domain in cancer
The Role of Protein Loops and Linkers in Conformational Dynamics and Allostery
The role of the central flexible region on the aggregation and conformational properties of human ataxin-3
Validation of protein models by a neural network approach
xPyder: a PyMOL plugin to analyze coupled residues and their networks in protein structures
Zinc induced folding is essential for TIM15 activity as an mtHsp70 chaperone
People
Agota Toth
Andre Vidas Olsen
Burcu Aykac Fas
Elena Papaleo
Emmanuelle Bignon
Enrico Riccardi
Isabelle da Piedade
Juan Salamanca Viloria
Lisa_Cantwell
Mads Nygaard
Maria Francesca Allega
Marika Capezzera
Marina Vabistsevits
Marta Lucchetta
Martin Manak
Matteo Lambrughi
Mette Vistesen
Miriam Di Marco
Richa Batra
Simon Kønig
Thilde Bagger Terkelsen
Valentina Sora
Zeljka Sanader
publications
Integrating atomistic molecular dynamics simulations, experiments and network analysis to study protein dynamics: strength in unity.
Research description
Sanne Bergstrand Poulsen
Papaleo Research Group
CBL-movies
Google Sites
Report abuse
Page details
Page updated
Google Sites
Report abuse