集団の多様性 x 非コード領域の大規模解析に関する論文の検討会
（ENCODEプロジェクト）"Annotation of functional variation in personal genomes using RegulomeDB." Boyle AP, Hong EL, Hariharan M, Cheng Y, Schaub MA, Kasowski M, Karczewski KJ, Park J, Hitz BC, Weng S, Cherry JM, Snyder M. Genome Res. 2012 Sep;22(9):1790-7. doi: 10.1101/gr.137323.112.
（ENCODEプロジェクト）"Personal and population genomics of human regulatory variation." Vernot B, Stergachis AB, Maurano MT, Vierstra J, Neph S, Thurman RE, Stamatoyannopoulos JA, Akey JM. Genome Res. 2012 Sep;22(9):1689-97. doi: 10.1101/gr.134890.111.
”Transcriptional architecture and chromatin landscape of the core circadian clock in mammals." Koike N, Yoo SH, Huang HC, Kumar V, Lee C, Kim TK, Takahashi JS. Science. 2012 Oct 19;338(6105):349-54. doi: 10.1126/science.1226339. Epub 2012 Aug 30.
個人ゲノムの暗号化とプライバシーに関する論文
"Identifying genetic relatives without compromising privacy."
He D, Furlotte NA, Hormozdiari F, Joo JW, Wadia A, Ostrovsky R, Sahai A, Eskin E.
Genome Res. 2014 Apr;24(4):664-72. doi: 10.1101/gr.153346.112. Epub 2014 Mar 10.
下記に書きました。
http://ameblo.jp/genomeanthro/entry-11859927370.html
日長周期の違いによる季節変化を感知する魚の脳の機能に関する論文
"The saccus vasculosus of fish is a sensor of seasonal changes in day length."
Nakane Y, Ikegami K, Iigo M, Ono H, Takeda K, Takahashi D, Uesaka M, Kimijima M, Hashimoto R, Arai N, Suga T, Kosuge K, Abe T, Maeda R, Senga T, Amiya N, Azuma T, Amano M, Abe H, Yamamoto N, Yoshimura T.
Nat Commun. 2013.
下記に書きました。
http://ameblo.jp/genomeanthro/entry-11804380572.html
Geographic Consortiumから出ている5本の論文のレビュー
Ancient DNA reveals key stages in the formation of central European mitochondrial genetic diversity. (Science. 2013)
The GenoChip: a new tool for genetic anthropology. (Genome Biol Evol. 2013)
Neolithic mitochondrial haplogroup H genomes and the genetic origins of Europeans. (Nat Commun. 2013)
Ancient DNA reveals prehistoric gene-flow from siberia in the complex human population history of North East Europe. (PLoS Genet. 2013)
Ancient DNA from European early neolithic farmers reveals their near eastern affinities. (PLoS Biol. 2010)
古病理学試料から中世ヨーロッパのハンセン病菌のゲノムを解読
"Genome-wide comparison of medieval and modern Mycobacterium leprae."
Schuenemann VJ, Singh P, Mendum TA, Krause-Kyora B, Jäger G, Bos KI, Herbig A, Economou C, Benjak A, Busso P, Nebel A, Boldsen JL, Kjellström A, Wu H, Stewart GR, Taylor GM, Bauer P, Lee OY, Wu HH, Minnikin DE, Besra GS, Tucker K, Roffey S, Sow SO, Cole ST, Nieselt K, Krause J.
Science. 2013 Jul 12;341(6142):179-83. doi: 10.1126/science.1238286. Epub 2013 Jun 13.
Slideshareにアップロードしました。
長期間に渡るパーソナルオミックスデータ解析
"Personal omics profiling reveals dynamic molecular and medical phenotypes."
Chen R, Mias GI, Li-Pook-Than J, Jiang L, Lam HY, Chen R, Miriami E, Karczewski KJ, Hariharan M, Dewey FE, Cheng Y, Clark MJ, Im H, Habegger L, Balasubramanian S, O'Huallachain M, Dudley JT, Hillenmeyer S, Haraksingh R, Sharon D, Euskirchen G, Lacroute P, Bettinger K, Boyle AP, Kasowski M, Grubert F, Seki S, Garcia M, Whirl-Carrillo M, Gallardo M, Blasco MA, Greenberg PL, Snyder P, Klein TE, Altman RB, Butte AJ, Ashley EA, Gerstein M, Nadeau KC, Tang H, Snyder M.
Cell. 2012 Mar 16;148(6):1293-307. doi: 10.1016/j.cell.2012.02.009.
バンツー語族の拡散を遺伝的データと言語学的データの分析から迫る
"Bringing together linguistic and genetic evidence to test the Bantu expansion."
de Filippo C, Bostoen K, Stoneking M, Pakendorf B.
Proc Biol Sci. 2012 Aug 22;279(1741):3256-63. doi: 10.1098/rspb.2012.0318. Epub 2012 May 23.
ゲノムが読まれた順番
論文にpublishされている順に（たぶん）。
S. cervisae 1997/05/29
C. elegans 1998/12/11
D. melanogaster 2000/03/24
Arabidopsis 2000/12/
Homo Sapiens 2001/2/15
Schizosaccharomyces pombe 2002/02/21
Takifugu 2002/08/22
Mus musculus 2002/12/05
Ciona intestinalis 2002/12/13
C. briggsae AF16 2003/11/17