Naeleria fowleri is the amoeba-like protozoa behind the devastating infection, Primary Amoebic Meningoencephalitis or PAM. The protist is a thermophile and therefore can be found in warm freshwater environments, such as hot springs, rivers, or lakes. The protist is particularly active during the summer months in the southern United States, and usually colonizes the muddy sediment in shallow water. PAM can only occur if water containing N. fowleri enters through the nose, where it can then begin infection in the brain.
1. BioSafety Level is #2
2. Agar media is ATCC Medium 1034 or freeze-dried version ATCC Medium 1034: Modified PYNFH Medium (available as ATCC cat. no. 327-X)
Alternate medias are ATCC Medium 710: Nelson's Culture Medium for Naegleria, ATCC Medium 803: M7 Medium and ATCC Medium 902: Schuster's Axenic Naegleria Medium
3. N. fowleri possesses mitochondria and prefers aerobic conditions, but can survive under anaerobic conditions as well. The organism grows best at 35 degrees Celsius in an axenic environment, one devoid of other microbes, but can also thrive in the presence of a bacterial species that can serve as a food source for the predatory protozoa.
4. Frozen cultures must be thawed immediately in a water bath at 35 °C for approximately 23 minutes or stored in a freezer at -70 °C for no more than one week. After thawing, culture must be placed in a tube or flask containing ATTC Medium 1034 or a similar variety. Cultures may then be incubated at 35 °C until later use. Every week, portions of cultures must be aseptically transferred into a new tube of media in order to prevent over-proliferation of cells.
The cell in the center of the image is a trophozite (adult stage) Naegleria fowleri. The image is of a CSF (Cerebrospinal Fluid) sample stained with Hematoxylin and Eosin (H&E), taken under a standard light microscope. The organism can be stained with Periodic Acid-Schiff (PAS), Trichrome, Giesma and Giesma-Wright stains as well. The morphology of the cell is not permanent, as the organism changes its shape in order to move, much like an ameoba. N. fowleri is identified in CSF smears such as this by a round cell body, granular cytoplasm, a large central nucleus with a large, deep-staining nucleolus.
A X3300 magnification cross-section TEM image of Naegleria fowleri, stained.
Laser fluorescent confocal microscopy image of Naegleria fowleri, at 3/4 X100 magnification. Each picture uses a different immunofluorescent antibody stain to target different proteins within the trophozite.
SEM micrograph of Naegleria fowleri. The image reveals suckers along the organism's body that it uses for attaching to and ingesting tissue
Culture Test: Samples with potential N. fowleri can be placed on a growth plate with a bacterial species, such as Escherichia coli, as a food source for the amoeba. The plate is placed in an incubator at 42 degrees Celsius. N. fowleri is a thermophilic protozoan, so it will survive the heat while other species will die. After incubation, if the plate has tracks through the E. coli colonies, then N. fowleri is present. The tracks in the colonies signify N. fowleri eating its way through the bacteria. N. fowleri is not the only autotrophic and thermophilic protozoan, however, and further testing is required to identify the organism.
Microscopy: If N. fowleri is detected on the culture, then the sample can be further investigated under phase-contrast microscopy, usually stained with a dye. If circular, large, isolated cells stained with the dye are detected, the N. fowleri has been identified.
PCR Analysis: The sample's DNA can be extracted and amplified with PCR. Afterwards, the amplified DNA can be sequenced and compared with known sequences for N. fowleri. If there is a significant match between sequences, then N. fowleri has been identified
The forward primer Nae3-For (5′-CAAACACCGTTATGACAGGG-3′), with a GC content of 50.0% and a 51.8 degrees C melting temperature, and the reverse primer Nae3-Rev (5′-CTGGTTTCCCTCACCTTACG-3′), with a GC content of 55% and a 53.8 degrees C melting temperature, can be used to identify N. fowleri. This PCR primer pair targets this 183 bp sequence of nucleotide 141 to 323 of the N. fowleri 18S rRNA gene. 18s rRNA was used instead of 16S rRNA since N. folweri is a eukaryote and does not 16 sRNA. Instead, eukaryotes have 18S rRNA, which is homologous to 16S rRNA in prokaryotes.
>AY376150.1 Naegleria fowleri isolate 7852 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence
TTGTAGAATGAGGAAGATTTAGGCCATAACAGGTCTGTGATGCTCTTAGATGTCCTGGGCTGCACGCGTA
CTACAATAACGGTACCAGCGAGCGCTATGGTTTTTTAACCCCTTATCCTAATAGGATTGGGTAAACTTTT
CAAACACCGTTATGACAGGGATCGAGGATTGGAACATCCTCGTGAACGAGGAATTCCTAGTAAGCGTGGT
TCATCATACCACATTGATTACGTCCCTGCCTTTTGTACACACCGCCCGTCGCTCCTACCGATGGGACGAA
GAGATGAACCTGGCGGACCAAACCGTAAGGTGAGGGAAACCAGTTAAATCTATTCGTCTGTAGGAAGGAA
AAGTCGTAACAAGGTCTTCGTAGGTGAACCTGCGTAGGGATCATTTATGGTAAAAAAGGTGAAAACCTTT
TTTTATGGTAAAAAAGGTGTATGGTAAAAAAGGTGAAAACCTTTTTTCCATTTACAAAAAATAACTCTGT
GCAATGGAGCACACGGCTCGTGTATCGATGAAGCCCGCGGCAAAAAGCGATATGTAATGAGATTCGTTAG
CCTCGAGATTCATCAAATTGGTGAACACAGTCTGGAC
Antigen Detection: A primary antibody is added to the sample. This antibody will bind one of several specific antigens on the surface of a N. fowleri cell. A secondary antibody is added to the sample. This antibody is either fluorescent or deposits a fluorescent compound once it binds. The secondary antibody binds the primary antibody, adding a second level of specificity. The sample is then observed under fluorescent microscopy for the antibody stain. If it is present, then N. fowleri has been identified.
This microbe can be easily confused with other amoebas, due to similarities in shape and size. The antigen test is the most useful, as there are several antigens very specific to only N. fowleri. The best method for identification is through the culture test followed by PCR analysis, although this is not always accurate, and the antigen test. If the organism passes these tests, then an investigator can fully confirm it as N. fowleri.
Naegleria fowleri is a pathogen that causes Primary Amebic Meningoencephalitis, or PAM. PAM begins anywhere from 1 to 9 days after infection by N. fowleri, with the median onset time being 5 days after infection. PAM proceeds through two stages. In Stage 1, symptoms include a severe headache, fever nausea and vomiting. Shortly after, the infection proceeds to Stage 2, where individuals experience a stiff neck, seizures, hallucinations, and altered mental status. Some individuals at Stage 2 can even fall into a coma. This disease is extremely fatal, with only 5 known survivors. Death tends to occur 1 to 18 days after symptoms begin, with the median time being 5 days after. For this reason, many PAM diagnoses do not occur until after death as a result of the autopsy.
Infection is extremely rare, as N. fowleri can only cause damage if inhaled through the nose. Infection can therefore be avoided by keeping hot, dirty freshwater or tap water out of one's nose. Traditionally N. fowleri is found in warm, freshwater environments with lots of mud and sediment, such as lakes or rivers. It can also be found in hot springs and, in rare cases, in poorly cleaned tap water and pool water. Avoiding the shallow areas of these locations, especially during the summer months, significantly lowers chances for infection.
N. fowleri is a concern to humans due to the disease it causes, which has a 95% fatality rate and tends to kill individuals less than a week after infection. This is due to the organism literally eating through the brain tissue of its host, causing severe headaches, fever, nausea, seizures, coma and even hallucinations. However, since infection is so rare, the threat posed by N. fowleri is no where near as significant as those posed by other microbial pathogens.
The only standardized treatment for PAM is cooling the body (hypothermia) as well as a breast cancer drug called miltefosine. Currently only 5 known people have survived infection by N. fowleri.
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