Exercise 4

• Run the below sequences on the snoscan and snoGPS webservers.
• How do the predictions compare to the annotation provided at the yeast snoRNA database?

>snR13 Chr 4 S. cerevisiae

AGGAAGTTTTTTCCTTTTTATATGATGAATATGAGTGCATTTGGCTCGAGTTGCTGTTTG

GCTTTTGCCAAATCAGTAACGGTGTGGAAAAACTCAAGCTACCTTTTTTTACTTTTATCT

GACC

>snR3 Chr 10

AACTTTGTCCTAAAGTACTAATCCACCGCATTAGACAGTACGAAGATCGAGCTATTTATT

TGAACACTCGGTCTTATTCGTGATAAGCGTAATGTGGAGAGATCAATTTCCGGGTCATTT

ATAAGAACTCGAGTGGATTGCTAGTTGTTTTGATTAGCTGAATGAGACTCGAGTGTCAGA

AGATGACTATATTT