Alignment

Align these sequences using the EBI's ClustalW server:

>H.pylori

FLRGFDGSFSDGHNDTYVSPSQIRRFALRNGDIVTGQVRSPKDQEKYYAL

LKIEAINYSPSDEIRNRPLFDNLTPLFPDEQIKLEYEPTKVTGRMLDLFS

PVGKGQRALIVAPPRTGKTELMKELAQGITSNHPEVELIILLVDERPEEV

TDMQRSVKGQVFSSTFDLPANNHIRIAELVLERAKRRVEMGKDVVVLLDS

ITRLARAYNAVTPSSGKVLSGGVDANALHRPKRFFGAARNIEEGGSLTII

ATALIETGSRMDEVIFEEFKGTGNSEIVLARNIADRRIYPAFDILKSGTR

KDNILLGKDRLTKVWVLRNVMQQMDDIEALSFVYSKMQQTKDN

>D.radiodurans

FVRTSGYLPGPHDVYVSMNMVRKNGMRRGDAVTGAVRVPKEGEQPNQRQK

FNPLVRLDSINGGSVEDAKKRPEFGKLTPLYPNQRLRLETSTERLTTRVI

DLIMPIGKGQRALIVSPPKAGKTTILQDIANAITRNNPECHLMVVLVDER

PEEVTDMQRSVKGEVIASTFDRPPSDHTSVAELAIERAKRLVEQGKDVVV

LLDSITRLGRAYNNASPASGRILSGGVDSTALYPPKRFLGAARNIEEGGS

LTIIATAMVETGSTGDTVIFEEFKGTGNAELKLDRKIAERRVFPAVDVNP

SGTRKDELLLSPDEFAIVHKLRRVLSGLDSHQAIDLLMSQLRKTKNN

>M.tuberculosis

FVRTSGYLPGPHDVYVSMNMVRKNGMRRGDAVTGAVRVPKEGEQPNQRQK

FNPLVRLDSINGGSVEDAKKRPEFGKLTPLYPNQRLRLETSTERLTTRVI

DLIMPIGKGQRALIVSPPKAGKTTILQDIANAITRNNPECHLMVVLVDER

PEEVTDMQRSVKGEVIASTFDRPPSDHTSVAELAIERAKRLVEQGKDVVV

LLDSITRLGRAYNNASPASGRILSGGVDSTALYPPKRFLGAARNIEEGGS

LTIIATAMVETGSTGDTVIFEEFKGTGNAELKLDRKIAERRVFPAVDVNP

SGTRKDELLLSPDEFAIVHKLRRVLSGLDSHQAIDLLMSQLRKTKNN

>C.pneumoniae

FLRSPTYNYLPSAEDIYVSPAQIRRFDLKKGDTIIGTIRSPKEKEKYFAL

LKVDKINGSTPDKAKERVLFENLTPLYPNQRIVMEMGKDHLAERVLDLTA

PIGKGQRGLIVAPPRSGKTVILQSIAHAIAVNNPDIVLIVLLIDERPEEV

TDMIRQVRGEVVASTFDEQPERHIQVAEMVIEKARRLVEHGNDVVILLDS

ITRLARAYNTVQPHSGKILTGGVDASALHKPKRFFGAARNIEGGGSLTIL

ATALIDTGSRMDEVIFEEFKGTGNMELVLDRRLSDRRTYPAIDLIKSGTR

KEELLYHPSELERVYLFRQAIADLTTIDAMHLLLGRLKKTNSN

>F.nucleatum

FLKETTLGKNIYMSASQIKRFKLRRGDQVLGEVRKPIGEEKNYAIRRVLK

ANDNDLAALESRVPYEELIPTYPTEQFVLGIEQGNISGRILDLISPIGKG

QRALIIAPPKAGKTTFISSIANALIEGQKDSEVWILLIDERPEEVTDIKE

NVEGATVFASTFDDDPKNHIKVTEEIIEKAKMKVEDGENVVILLDSLTRL

ARAYNIVMPSSGKLLSGGIDPTALYHPKNFFGAARNIKDGGSLTIIATIL

VDTGSKMDEVIYEEFKSTGNCDIYLDRQLAEFRIFPAIDITKSGTRKEEL

LLNKNQIDDIWNLRRLLNDYDNKVSATSALIKAIKTTRNN

>S.enterica

FLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFAL

LKVNEVNYDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLD

LASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERP

EEVTEMQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIIL

LDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRFFGAARNVEEGGSL

TIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDYNRS

GTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTN

>B.thetaiotaomicron

FLRSSDYNYLSSPDDIYVSQSQIKLFGLKTGDVVEGIIRPPKEGEKYFPL

VKVSKINGRDAAFVRDRVPFEHLTPLFPDEKFRLCKGGYSDSMSARVVDL

FAPIGKGQRALIVAQPKTGKTILMKDIANAIAANHPEVYMIMLLIDERPE

EVTDMARSVNAEVIASTFDEPAERHVKIAGIVLEKAKRLVECGHDVVIFL

DSITRLARAYNTVSPASGKVLSGGVDANALHKPKRFFGAARNIENGGSLT

IIATALIDTGSKMDEVIFEEFKGTGNMELQLDRNLSNKRIFPAVNITASS

TRRDDLLLDKTTLDRMWILRKYLADMNPIEAMDFVKDRLEKTRDN

>L.interrogans

FLRSPDYNYVPGPDDIYVSPSQIKLFGLRTGDTVEGQIRPPKESERFFAM

LRVETVNSYTPDVAGKRALFDNLTPLYPNERLKMEYDPSMLDTRILDLMC

PIGKGQRALIVAPPRTGKTILMQNIANAITSNHPECSLIVLLIDERPEEV

TDMARHVRGEVVSSTFDEPAQRHVQVAEMVIEKAKRLVEHGKDVVILLDS

ITRLARAYNQVIPTSGKILSGGVDSNALHKPKRFFGAARNIEEGGSLTII

ATALIDTGSKMDEVIFEEFKGTGNMEIHLDRKLSDKRIFPAIDINKSGTR

KEELLITKDVLQKVFVLRKVLSPMSITESMELLLEKMRLSKTN

>P.marinus

EQGPVKTKTTSPIHREAPKLTDLETKPKVFETGIKVIDLLAPYRQGGKVG

LFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKES

GVINADDLTQSKVALCFGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVL

LFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGELQERITSTLEG

SITSIQAVYVPADDLTDPAPATTFAHLDATTVLARALAAKGIYPAVDPLD

STSTMLQPSVVGDEHYRTARAVQSTLQRYKELQDIIAILGLDELSEDD

>U.parvum

ETNKTPKYVEMNSTILNERYVDKSIEIVETGIKAIDFFMPILKGYKLGIF

GGAGVGKTVLMKEIIFNLNRHKQANSNIFIGSGERSREAIELYNELTASN

LMPNSVMFISKMNEAPGARTSIVPIGITAAEYLRDQNKENVLLFIDNIYR

FIQAENEVSTALGKKPSVGGYQSTLESDVTHIQNRLFRNKNGSITSFQTI

FLPMDDLSDPSAVAVFNHLDGKLVLSRAQAAKNIFPAFDPLASSTNAIDP

KIIGERHYNAIIETKKVLKAYKDLEDVILILGFDELDAES

>B.subtilis

FLRPINYSPSSEDIYISASQIRRFDLRNGDKVSGKVRPPKENERYYGLLH

VEAVNGDDPESAKERVHFPALTPLYPDRQMVLETKPNFLSTRIMDMMAPV

GFGQRGLIVAPPKAGKTMLLKEIANSITANQPEAELIVLLIDERPEEVTD

IERSVAGDVVSSTFDEVPENHIKVAELVLERAMRLVEHKKDVIILMDSIT

RLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFFGAARNIEEGGSLTILAT

ALVDTGSRMDDVIYEEFKGTGNMELHLDRSLAERRIFPAIDIRRSGTRKE

ELLVPKEHLDRLWSIRKTMSDSPDFAEKFMRKMKKTKTN

>C.difficile

FLRGSNYLSTEGDVYVSPSQIRRFNMKTGDKIKGITRHPKSGEKFRALLY

VQKINDENPDTAIQRNAFETLTPIFPEERLTLETNRNEIATRIIDLISPI

GKGQRGLIVAPPKAGKTVLLKSVANSIAKNHPNVELIVLLIDERPEEVTD

MKESIEGDVIYSTFDQVSSHHVKVAEMVLNRAQRLVEHGKDVVILLDSIT

RLARAYNLTISPTGRTLSGGIDPGALHGPKKFFGAARNIRQGGSLTILGT

ALVETGSRMDDVIFEEFKGTGNMELHLDRKLAEKRIFPAIDIYKSGTRRD

DLLLDDEEKTALWRLRREMSNNSVMEITDKVIELIKRTKDN

>S.griseus

FIRTSGYLPGPNDVYVSLAQVRKNGLRKGDHVTGAVRQPKDGERREKFNA

LVRLDSVNGMAPESGRGRPEFQKLTPLYPQDRLRLETDSNVLTTRIIDLV

APIGKGQRGLIVAPPKTGKTMILQAIANAITVNSPECHLMVVLVDERPEE

VTDMQRSVKGEVISSTFDRPAEDHTTVAELAIERAKRLVELGHDVVVLLD

SITRLGRAYNLAAPASGRILSGGVDSTALYPPKRFFGAARNIEDGGSLTI

LATALVETGSRMDEVIFEEFKGTGNMELKLDRKLSDKRIFPAVDVDASST

RKEEILLGTDELAVVWKLRRVLHALDQQQAIELLLDRMKKTQSN

>F.nodosum

FLRSLETMLTGPKDIYVSQSQIRKFNLNTGDIVSGVIRPPKEGERFNAMI

KIEAINYKPPEFANERVNFENLTPDYPKERYILETDKEVYSTRLIDLFAP

IGKGQRGMIVAPPKAGKTTILKEIANGIARNHPDTIRIVLLIDERPEEVT

DIKESVNAKVIAAPFDMPSDKQIKIAELTLEMCKRLVEYGNHVVVLLDSL

TRLARVYNITVPPSGKLLSGGVDPAALYKPKHFFGAARNTREGGSLTIIA

TALIETGSKMDEVIFEEFKGTGNMELVLSRQLANKRIFPAINISLSGTRK

EELLLSQNDLKKIWIIRRMLSSMSEEEGIKLILSKLKETKSN

>M.infernorum

FLRSEAYNYFPCQEDVYVSPALIRKFGLKKGNLVSGPIRPPKEKERYFSL

LQVEKIENEEPEKIRGRIIFDNLTPIFPNRRIFLEGKSGDLSMRVMDLVT

PIGFGQRGLIVAPPRTGKTVLIQKIANAITENHPDAHLIILLVDERPEEV

TDMERSVRGEVISSTFDETPERHVQVAEMVIERAKRMAENKIDVVILLDS

LTRLARAYNTLQPHSGKILTGGVDANALQKPRRFFATARNLEEGGSVTII

ATALIDTGSKMDDVIFEEFKGTGNMELHLDRALVDKRIYPAINIPKSGTR

REELLYHPDELIRIHVLRRALSSVPPIEAMELLLERLKKTKNN

>T.yellowstonii

FLRSPDYSYLPSPDDIYVSPSQIRKFGLRTGDLITGQIRPPKENERYFAL

LKVESINGKPVEESIIRPLFDNLTPYYPTEKINLEYNPADYSTRVMDLLT

PVGKGQRGLIVAAPRTGKTMLLQSIAKAIKKNHSEIYLIVLLIDERPEEV

TDWRRQVTGAEIISSTFDEPAQRHCQVSEMVIERAKRLVEEGEDVVILLD

SLTRLARAYNAITPASGKVLSGGLEATALQKPKRFFGTARNIEEGGSLTI

IATALVETGSRMDDVIFEEFKGTGNMEVHLDRKLADKRIFPSIDIGASGT

RKEELLVAPDVLNKVWILRKVLSTLSPIEAMEFLLSKLKGTKSN

>E.coli

FLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFAL

LKVNEVNFDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLD

LASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERP

EEVTEMQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIIL

LDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRFFGAARNVEEGGSL

TIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDYNRS

GTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTN

>H.volcanii

LESKMDSAFLDRGVDAPGIDLDEKWEFEPTVSEGDEVAPGDVVGTVPETV

TIEHKVMVPPDFGGGEVVAVEEGEFSVTEAVVELDSGEEITMHQEWPVRQ

ARPAAEKKTPREPLVSGQRILDGLFPIAKGGTAAIPGPFGSGKTVTQHQL

AKWADADIVVYVGCGERGNEMTEVIEDFPELDDPKTGNPLMARTCLIANT

SNMPVAARESCIYTGITIAEYYRDMGYDVALMADSTSRWAEAMREISSRL

EEMPGEEGYPAYLAARLSEFYERAGYFTTVNGEEGSVSVIGAVSPPGGDF

SEPVTQNTLRIVKTFWALDADLAERRHFPAINWNESYSLYQEQLDPWFVE

NVEDDWAEERQWAVDVLDEENELQEIVQLVGKDALPEDQ