A review on shear jamming, Deng Pan, Yinqiao Wang, Hajime Yoshino, Jie Zhang, Yuliang Jin, Physics Reports 1038 (2023) 1–18(2023).

Spatially heterogeneous learning by a deep student machine, Hajime Yoshino, Phys. Rev. Research 5, 033068 (2023)

Replica theory for disorder-free spin-lattice glass transition on a treelike simplex network, Kota Mitsumoto and Hajime Yoshino, Phys. Rev. B 107,054412 (2023). 

Computer simulations of the Gardner transition in structural glasses, Yuliang Jin and Hajime Yoshino, arXiv:2206.07868.

Supercooled Jahn-Teller Ice, Kota Mitsumoto, Chisa Hotta and Hajime Yoshino, Phys. Rev. Research 4, 033157 (2022).

Evolution enhances the mutational robustness and suppresses emergence of a new phenotype, Tadamune Kaneko, Macoto Kikuchi,PLoS computational biology 18.1 (2022): e1009796.

A jamming plane of sphere packings, Yuliang Jin and Hajime Yoshino, PNAS 118 (14)  e2021794118  (2021) 

Multiple glass transitions and higher-order replica symmetry breaking of binary mixtures, Harukuni Ikeda, Kunimasa Miyazaki, Hajime Yoshino, and Atushi Ikeda, Phys. Rev. E 103, 022613  (2021).

Emergence of cooperative bistability and robustness of gene regulatory networks, Shintaro Nagata and Macoto Kikuchi, PLoS Comput Biol 16(6): e1007969 (2020).

From complex to simple: hierarhical free-energy landscape renormalized in deep neural networks, Hajime Yoshino,  SciPost Phys. Core 2, 005 (2020).

Spin-orbital glass transition in a model frustrated pyrochlore magnet without quenched disorder, Kota Mitsumoto, Chisa Hotta and Hajime Yoshino, Phys. Rev. Lett. 124, 087201 (2020). 

A stability-reversibility map unifies elasticity, plasticity, yielding, and jamming in hard sphere glasses, Yuliang Jin, Pierfrancesco Urbani, Francesco Zamponi and Hajime Yoshino, Science Advances 4 (12), eaat6378 (2018).

Disorder-free spin glass transitions and jamming in exactly solvable mean-field models, Hajime Yoshino, SciPost Phys. 4(6), 040 (2018).

Orientational ordering of closely packed Janus particles, Kota Mitsumoto and Hajime Yoshino, Soft Matter 14(19) 3919-3928 (2018). 

Exploring the complex free energy landscape of the simplest glass by rheology, Yuliang Jin and Hajime Yoshino, Nature Communications 8, 14935 (2017).

 Characterizing and distinguishing free and jammed traffic flows from the distribution and correlation of experimental speed data, Shin-ichi Tadaki, Macoto Kikuchi, Akihiro Nakayama, Akihiro Shibata, Yuki Sugiyama and Satoshi Yukawa, New J. Phys., vol.18 083022 (2016).

Protocol-dependent shear modulus of amorphous solids, Daijyu Nakayama, Hajime Yoshino and Francesco Zamponi, Journal of Statistical Mechanics: Theory and Experiment 2016 (10), 104001 (2016).

 Quantitative explanation of circuit experiments and real traffic using the optimal velocity model, Akihiro Nakayama, Macoto Kikuchi, Akihiro Shibata, Yuki Sugiyama, Shin-ichi Tadaki, Satoshi Yukawa, New J. Phys., vol.18 043040 (2016).  

The interplay of intrinsic disorder and macromolecular crowding on alpha-synuclein fibril formation, Nobu C. Shirai and Macoto Kikuchi, J. Chem. Phys. Vol.144 (2016) 055101. 

Following the Evolution of Hard Sphere Glasses in Infinite Dimensions under External Perturbations: Compression and Shear Strain, Corrado Rainone, Pierfrancesco Urbani, Hajime Yoshino, and Francesco Zamponi, Phys. Rev. Lett. 114, 015701 (2015).

Nucleotide-dependent structural fluctuations and regulation of microtubule-binding affinity of KIF1A, Ryo Kanada, Fumiko Takagi and Macoto Kikuchi, Proteins: Structure, Function, and Bioinformatics Vol.83 (2015) p.809-819. 

 Numerous but Rare: An Exploration of Magic Squares, Akimasa Kitajima and Macoto Kikuchi, PLOS ONE, vol.10 (2015) e0125062.