The following MATLAB programs were used as a part of Ph.D. thesis submitted.
Thesis Title: Development of next generation image reconstruction algorithms for Diffuse Optical and Photoacoustic Tomography
Jayaprakash PhD Thesis
Matlab Based Programs (Requires NIRFAST and k-wave):
1) reconstruct_cw_bpd.m
2) reconstruct_cw_bpd_fast_svd.m
3) reconstruct_cw_GCV.m*
4) reconstruct_cw_Lp.m**
5) reconstruct_cw_sl0.m***
6) reconstruct_region_opt_hard_prior.m
7) bpd_salsa_sparsemtx_fast_svd.m****
8) opt_lambda_cw.m*
9) PAT_CODE.m
10) sysBuildPAT_mod_Band.m
11) inverse.m
* Adapted from Regularization Tools (version 4.1)
** Adapted from Non-convex Synthesis and Analysis Prior Toolbox (Link)
*** Adapted from Smooth-L0 Toolbox (Link)
**** Adapted from Sparsity in Signal Processing Toolbox (Link)