Holliday Junction

You receive 3 different junctions, with different DNA sequences. From the measured dwell times, you should be able to determine which junction is which.

Junction 1 XR (Dt_up= 0.290 s, Dt_down= 0.255 s )

J1Lb : CCC TAG CAA GCC GCT GCT ACG G

Biot-J1Th :/5Biosg/CCG TAG CAG CGA GAG CGG TGG G

Cy5-J1Tr : /5Cy5/CCC ACC GCT CTT CTC AAC TGG G

Cy3-J1x : /5Cy3/CCC AGT TGA GAG CTT GCT AGG G

Junction 1 XB (Dt_up= 0.138 s, Dt_down= 0.306 s )

Cy5 -J1b : /5Cy5/CCC TAG CAA GCC GCT GCT ACG G

J1h : CCG TAG CAG CGA GAG CGG TGG G

Biot-J1r : /5Biosg/CCC ACC GCT CTT CTC AAC TGG G

Cy3-J1x : /5Cy3/CCC AGT TGA GAG CTT GCT AGG G

Junction 7 (Dt_up= 0.333 s, Dt_down= 0.223 s )

Cy5-J7b : /5Cy5/CC CTA GCA AGC CGC TGC TAC GG

Cy3-J7h : /5Cy3/CC GTA GCA GCG CGA GCG GTG GG

Biot-J7r : /5BiosG/CC CAC CGC TCG GCT CAA CTG GG

J7x : CCC AGT TGA GCG CTT GCT AGG G