Seminal Yeast Literature

Classical Yeast Cell Biology, Early Maps, and Genome Surveys

Ephrussi B, Hottingeur H and Tavlitski J. (1949) Action de l'acriflavine sur les levures. II. Étude génétique du mutant "petite colonie". Ann Inst Pasteur 76:419-50.
Lindegren CC. (1949) The Yeast Cell: Its Genetics and Cytology. Educational Publishers Inc, 18:2. Open Library
Pomper S and Burkholder PR. (1949) Studies on the Biochemical Genetics of Yeast. Proc Natl Acad Sci USA 35(8):456-64. PMID:16588920
Reaume SE and Tatum EL. (1949) Spontaneous and nitrogen mustard-induced nutritional deficiencies in Saccharomyces cerevisiae. Arch Biochem 22(3):331-8. PMID:18134538
Lindegren CC and Lindegren G. (1951) Linkage relationships in Saccharomyces of genes controlling the fermentation of carbohydrates and the synthesis of vitamins, amino acids and nucleic acid components. Indian Phytopathol 4:11-20.
Roman H, Hawthorne DC and Douglas HC. (1951) Polyploidy in yeast and its bearing on the occurrence of irregular genetic ratios. Proc Natl Acad Sci USA 37(2):79-84. PMID:14808168
Pomper S. (1952) Purine-requiring and pyrimidine-requiring mutants of Saccharomyces cerevisiae. J Bacteriol 63(6):707-13. PMID:14938332
Hawthorne DC. (1956) The genetics of galactose fermentation in Saccharomyces hybrids. Compt Rend Lab Carlsberg, Ser Physiol 26:149-160.
Lindegren CC, Lindegren G, Shult EE and Desborough S. (1959) Chromosome maps of Saccharomyces. Nature 183(4664):800-2. PMID:13644197
Hawthorne DC and Mortimer RK. (1960) Chromosome Mapping in Saccharomyces: Centromere-Linked Genes. Genetics 45(8):1085-110. PMID:17247984
Hartwell LH. (1970) Genetic control of the cell-division cycle in yeast. I. Detection of mutants. Proc Natl Acad Sci USA 66(2):352-9. PMID:5271168
Hartwell LH. (1971) Genetic control of the cell division cycle in yeast. II. Genes controlling DNA replication and its initiation. J Mol Biol 59(1):183-94. PMID: 5283752
Culotti J. and Hartwell LH. (1971) Genetic control of the cell division cycle in yeast. 3. Seven genes controlling nuclear division. Exp Cell Res 67(2):389-401. PMID: 5097524
Hartwell LH. (1971) Genetic control of the cell division cycle in yeast. IV. Genes controlling bud emergence and cytokinesis. Exp Cell Res 69(2):265-76. PMID: 4950437
Hartwell LH, Mortimer RK, Culotti J and Culotti M. (1973) Genetic Control of the Cell Division Cycle in Yeast: V. Genetic Analysis of cdc Mutants. Genetics 74(2):267-286. PMID: 17248617
Hartwell LH, Culotti J, Pringle JR and Reid BJ. (1974) Genetic control of the cell division cycle in yeast. Science 183(4120):46-51. PMID: 4587263
Johnston GC, Pringle JR and Hartwell LH. (1977) Coordination of growth with cell division in the yeast Saccharomyces cerevisiae. Exp Cell Res 105(1):79-98. PMID: 320023
Novick P and Schekman R. (1979) Secretion and cell-surface growth are blocked in a temperature-sensitive mutant of Saccharomyces cerevisiae. Proc Natl Acad Sci U S A 76(4):1858-62. PMID: 377286
Novick P, Field C and Schekman R. (1980) Identification of 23 complementation groups required for post-translational events in the yeast secretory pathway. Cell 21(1):205-15. PMID: 6996832
Clarke L and Carbon J. (1980) Isolation of a yeast centromere and construction of functional small circular chromosomes. Nature 287(5782):504-9. PMID: 6999364
Mortimer RK and Schild D. (1980) Genetic map of Saccharomyces cerevisiae. Microbiol Rev 44(4):519-71. PMID:7010111
Novick P, Ferro S and Schekman R. (1981) Order of events in the yeast secretory pathway. Cell 25(2):461-9. PMID: 7026045
Carlson M, Osmond BC and Botstein D. (1981) Mutants of yeast defective in sucrose utilization. Genetics 98(1):25-40. PMID: 7040163
Orr-Weaver TL, Szostak JW and Rothstein RJ. (1981) Yeast transformation: a model system for the study of recombination. Proc Natl Acad Sci U S A 78(10):6354-8. PMID:6273866
Klapholz S and Esposito RE. (1982) Chromosomes XIV and XVII of Saccharomyces cerevisiae constitute a single linkage group. Mol Cell Biol 2(11):1399-409. PMID:6761582
Carlson M and Botstein D. (1983) Organization of the SUC gene family in Saccharomyces. Mol Cell Biol 3(3):351-9. PMID:6843548
Hieter P, Pridmore D, Hegemann JH, Thomas M, Davis RW and Philippsen P. (1985) Functional selection and analysis of yeast centromeric DNA. Cell 42(3):913-21. PMID:2996783
Olson MV, Dutchik JE, Graham MY, Brodeur GM, Helms C, Frank M, MacCollin M, Scheinman R and Frank T. (1986) Random-clone strategy for genomic restriction mapping in yeast. Proc Natl Acad Sci USA 83(20):7826-30. PMID:3463999
Chow TH, Sollitti P and Marmur J. (1989) Structure of the multigene family of MAL loci in Saccharomyces. Mol Gen Genet 217(1):60-9. PMID:2549370
Link AJ and Olson MV. (1991) Physical map of the Saccharomyces cerevisiae genome at 110-kilobase resolution. Genetics 127(4):681-98. PMID:2029969
Percudani R, Pavesi A and Ottonello S. (1997) Transfer RNA gene redundancy and translational selection in Saccharomyces cerevisiae. J Mol Biol 268(2):322-30. PMID:9159473
Deshpande AM and Newlon CS. (1992) The ARS consensus sequence is required for chromosomal origin function in Saccharomyces cerevisiae. Mol Cell Biol 12(10):4305-13. PMID:1406623
Riles L, Dutchik JE, Baktha A, McCauley BK, Thayer EC, Leckie MP, Braden VV, Depke JE and Olson MV. (1993) Physical maps of the six smallest chromosomes of Saccharomyces cerevisiae at a resolution of 2.6 kilobase pairs. Genetics 134(1):81-150. PMID:8514151
Hegemann JH and Fleig UN. (1993) The centromere of budding yeast. Bioessays 15(7):451-60. PMID:8379948
Shirahige K, Iwasaki T, Rashid MB, Ogasawara N and Yoshikawa H. (1993) Location and characterization of autonomously replicating sequences from chromosome VI of Saccharomyces cerevisae. Mol Cell Biol 13(8):5043-56. PMID:8336734
Louis EJ, Naumova ES, Lee A, Naumov G and Haber JE. (1994) The chromosome end in yeast: its mosaic nature and influence on recombinational dynamic. Genetics 136(3):789-802. PMID:8005434
Percudani R, Pavesi A and Ottonello S. (1997) Transfer RNA gene redundancy and translational selection in Saccharomyces cerevisiae. J Mol Biol 268(2):322-30. PMID:9159473
Kim JM, Vanguri S, Boeke JD, Gabriel A and Voytas DF. (1998) Transposable elements and genome organization: a comprehensive survey of retrotransposons revealed by the complete Saccharomyces cerevisiae genome sequence. Genome Res 8(5):464-78. PMID:9582191
Yang C, Theis JF and Newlon CS. (1999) Conservation of ARS elements and chromosomal DNA replication origins on chromosomes III of Saccharomyces cerevisiae and S. carlsbergensis. Genetics 152(3):933-41. PMID:10388813
Sil A, Herskowitz I. (1996) Identification of asymmetrically localized determinant, Ash1p, required for lineage-specific transcription of the yeast HO gene. Cell 8;84(5):711-22. PMID: 8625409
Bobola N, Jansen RP, Shin TH, Nasmyth K. (1996) Asymmetric accumulation of Ash1p in postanaphase nuclei depends on a myosin and restricts yeast mating-type switching to mother cells. Cell. 8;84(5):699-709. PMID: 8625408

Sequencing Consortium Results for each Chromosome

Goffeau A, Barrell BG, Bussey H, Davis RW, Dujon B, et al. (1996) Life with 6000 genes. Science 274(5287):546, 563-7. PMID:8849441

Bussey H, Kaback DB, Zhong W, Vo DT, Clark MW, et al. (1995) The nucleotide sequence of chromosome I from Saccharomyces cerevisiae. Proc Natl Acad Sci USA 92(9):3809-13. PMID:7731988
Feldmann H, Aigle M, Aljinovic G, André B, Baclet MC, et al. (1994) Complete DNA sequence of yeast chromosome II. EMBO J 13(24):5795-809. PMID:7813418
Oliver SG, van der Aart QJ, Agostoni-Carbone ML, Aigle M, Alberghina L, et al. (1992) The complete DNA sequence of yeast chromosome III. Nature 357(6373):38-46. PMID:1574125

Jacq C, Alt-Mörbe J, André B, Arnold W, Bahr A, et al. (1997) The nucleotide sequence of Saccharomyces cerevisiae chromosome IV. Nature 387(6632):75-8. PMID:9169867

Dietrich FS, Mulligan J, Hennessy K, Yelton MA, Allen E, et al. (1997) The nucleotide sequence of Saccharomyces cerevisiae chromosome V. Nature 387(6632):78-81. PMID:9169868

Murakami Y, Naitou M, Hagiwara H, Shibata T, Ozawa M, et al. (1995) Analysis of the nucleotide sequence of chromosome VI from Saccharomyces cerevisiae. Nat Genet 10(3):261-8. PMID:7670463

Tettelin H, Agostoni Carbone ML, Albermann K, Albers M, Arroyo J, et al. (1997) The nucleotide sequence of Saccharomyces cerevisiaechromosome VII. Nature 387(6632):81-4. PMID:9169869

Johnston M, Andrews S, Brinkman R, Cooper J, Ding H, et al. (1994) Complete nucleotide sequence of Saccharomyces cerevisiae chromosome VIII. Science 265(5181):2077-82. PMID:8091229

Churcher C, Bowman S, Badcock K, Bankier A, Brown D, et al. (1997) The nucleotide sequence of Saccharomyces cerevisiae chromosome IX. Nature 387(6632):84-7. PMID:9169870

Galibert F, Alexandraki D, Baur A, Boles E, Chalwatzis N, et al. (1996) Complete nucleotide sequence of Saccharomyces cerevisiae chromosome X. Embo J 15(9):2031-49. PMID:8641269

Dujon B, Alexandraki D, André B, Ansorge W, Baladron V, et al. (1994) Complete DNA sequence of yeast chromosome XI. Nature 369(6479):371-8. PMID:8196765

Johnston M, Hillier L, Riles L, Albermann K, André B, et al. (1997) The nucleotide sequence of Saccharomyces cerevisiae chromosome XII. Nature 387(6632):87-90. PMID:9169871

Bowman S, Churcher C, Badcock K, Brown D, Chillingworth T, et al. (1997) The nucleotide sequence of Saccharomyces cerevisiae chromosome XIII. Nature 387(6632):90-3. PMID:9169872

Philippsen P, Kleine K, Pöhlmann R, Düsterhöft A, Hamberg K, et al. (1997) The nucleotide sequence of Saccharomyces cerevisiae chromosome XIV and its evolutionary implications. Nature 387(6632):93-8. PMID:9169873

Dujon B, Albermann K, Aldea M, Alexandraki D, Ansorge W, et al. (1997) The nucleotide sequence of Saccharomyces cerevisiae chromosome XV. Nature 387(6632):98-102. PMID:9169874

Bussey H, Storms RK, Ahmed A, Albermann K, Allen E, et al. (1997) The nucleotide sequence of Saccharomyces cerevisiae chromosome XVI. Nature 387(6632):103-5. PMID:9169875

Foury F, Roganti T, Lecrenier N and Purnelle B. (1998) The complete sequence of the mitrochondrial genome of Saccharomyces cerevisiae. FEBS Lett 440(3):325-31. PMID:9873296

Strains

Mortimer R and Johnston JR. (1986) Geneology of principal strains of the yeast genetic stock center. Genetics 113(1):35-43. PMID:3519363
Tawfik OW, Papasian CJ, Dixon AY, et al. (1989) Saccharomyces cerevisiae pneumonia in a patient with acquired immune deficiency syndrome. J Clin Microbiol 27(7):1689-91. PMID:2671026
Winston F, Dollard C and Ricupero-Hovasse SL. (1995) Construction of a set of convenient Saccharomyces cerevisiae strains that are isogenic to S288C. Yeast 11(1):53-5. PMID:7762301
Pérez-Ortín JE, Querol A, Puig S, et al. (2002) Molecular characterization of chromosomal rearrangement involved in the adaptive evolution of yeast strains. Genome Res 12(10):1533-9. PMID:12368245
Sniegowski PD, Dombrowski PG and Fingerman E. (2002) Saccharomyces cerevisiae and Saccharomyces paradoxus coexist in a natural woodland site in North America and display different levels of reproductive isolation from European conspecifics. FEMS Yeast Res 1(4):299-306. PMID:12702333
Fay JC, McCullough HL, Sniegowski PD, et al. (2004) Population genetic variation in gene expression is associated with phenotypic variation in Saccharomyces cerevisiae. Genome Biol 5(4):R26. PMID:15059259
Gu Z, David L, Petrov D, et al. (2005) Elevated evolutionary rates in the laboratory strain of Saccharomyces cerevisiae. Proc Natl Acad Sci USA 102(4):1092-7. PMID:15647350
Ronald J, Tang H and Brem RB. (2006) Genomewide evolutionary rates in laboratory and wild yeast. Genetics 174(1):541-4. PMID:16816417
Wei W, McCusker JH, Hyman RW, et al. (2007) Genome sequencing and comparative analysis of Saccharomyces cerevisiae strain YJM789. (2007) Proc Natl Acad Sci USA 104(31):12825-30. PMID:17652520
Omura F, Hatanaka H and Nakao Y. (2007) Characterization of a novel tyrosine permease of larger brewing yeast shared by Saccharomyces cerevisiae strain RM11-1a. FEMS Yeast Res 7(8):1350-61. PMID:17825063
Borneman AR, Forgan AH, Pretorius IS, et al. (2008) Comparative genome analysis of a Saccharomyces cerevisiae wine strain. FEMS Yeast Res 8(7):1185-95. PMID:18778279
Argueso JL, Carazzolle MF, Mieczkowski PA, et al. (2009) Genome structure of a Saccharomyces cerevisiae strain widely used in bioethanol production. Genome Res 19(12):2258-70. PMID:19812109
Novo M, Bigey Y, Beyne E, et al. (2009) Eukaryote-to-eukaryote gene transfer events revealed by the genome sequence of the wine yeast Saccharomyces cerevisiae EC1118. Proc Natl Acad Sci USA 106(38):16333-8. PMID:19805302
Borneman AR, Desany BA, Riches D, et al. (2011) Whole-genome comparison reveals novel genetic elements that characterize the genome of industrial strains of Saccharomyces cerevisiae. PLoS Genet 7(2):e1001287. PMID:21304888
Akao T, Yashiro I, Hosoyama A, et al. (2011) Whole-genome sequencing of sake yeast Saccharomyces cerevisiae Kyokai no. 7. DNA Res 18(6):423-34. PMID:21900213
Libkind D, Hittinger CT, Valério E, et al. (2011) Microbe domestication and the identification of the wild genetic stock of lager-brewing yeast. Proc Natl Acad Sci USA 108(35):14539-44. PMID:21873232
Nguyen HV, Legras JL, Neuvéglise C, et al. (2011) Deciphering the hybridisation history leading to the Lager lineage based on mosaic genomes of Saccharomyces bayanus strains NBRC1948 and CBS380. PLoS One 6(10):e25821. PMID:21998701
Nijkamp JF, van den Broek M, Datema E, et al. (2012) De novo sequencing, assembly and analysis of the genome of the laboratory strain Saccharomyces cerevisiae CEN.PK113-7D, a model for modern industrial biotechnology. Microb Cell Fact 11:36. PMID:22448915
Ralser M, Kuhl H, Ralser M, et al. (2012) The Saccharomyces cerevisiae W303-K6001 cross-platform genome sequence: insights into ancestry and physiology of a laboratory mutt. Open Biol 2(8):120093. PMID:22977733
Borneman AR, Desany BA, Riches D, et al. (2012) The genome sequence of the wine yeast VIN7 reveals an allotriploid hybrid genome with Saccharomyces cerevisiae and Saccharomyces kudriavzevii origins. FEMS Yeast Res 12(1):88-96. PMID:22136070
Erny C, Raoult P, Alais A, et al. (2012) Ecological success of a group of Saccharomyces cerevisiae / Saccharomyces kudriavzevii hybrids in the Northern European wine-making environment. Appl Environ Microbiol 78(9):3256-65. PMID:22344648
Peris D, Lopes CA, Belloch C, et al. (2012) Comparative genomics among Saccharomyces cerevisiae x Saccharomyces kudriavzevii natural hybrid strains isolated from wine and beer reveals different origins. BMC Genomics 13:407. PMID:22906207

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