MEMOSA-FVM

USEFUL Links

WIKI: https://memshub.org/infrastructure/memosa
DASHBOARD: http://dash.prism.nanohub.org/cdash/index.php?project=MEMOSA
DOCS & CODE: http://dash.prism.nanohub.org/docs/fvm/

Log onto Aerosun & checkout code using svn

-bash-3.00$ ssh aerosun

-bash-3.00$ svn checkout https://memshub.org/infrastructure/memosa/svn/trunk FVM-trial

If you want to see which files have been modified

-bash-3.00$ svn status

Each time, update the files (specially useful when 2 or more developers working on same file at the same time)

-bash-3.00$ cd FVM-trial

-bash-3.00$ svn update

To add or delete files

-bash-3.00$ svn add new.txt

-bash-3.00$ svn commit

-bash-3.00$ svn delete new.txt

-bash-3.00$ svn commit

Repository Layout (purple, useful for fvm)
data src tools pkgs tests vv doc
/ \ / | \ | / | \
exp md lammps MPM fvm build rlog fltk gmsh
/ | \
build etc scripts src test packages SConstruct
/ | \ | / | \
./testFlowmodel.py, *.py modules *.cas, eg. cav32.cas
/ | \ \
atypes exporters fvmbase importers esbgkbase
/ | \
*.cpp *.h *.i (most imp FlowModel_impl.h )

* data - experimental data, molecular dynamics data and probably other.

* src - the source for the main MEMOSA components.

* tools - build scripts, converters and other minor pieces of software we write.

* pkgs - externally developed packages we require. These will generally not be modified.

* tests - high-level MEMOSA tests.

Configuration and build

FIle1(aerosun-pkgs in FVM-trial/config/):

# config file for aerosun builds (aerosun-pkgs)

python:

Build=True

numpy:

Build=True

fltk:

Build=True

gsl:

Build=True

gmsh:

Build=True

rlog:

Build=True

boost:

Build=True

swig:

Build=True

fftw:

Build=True

netCDF4:

Build=False

netcdf:

Build=False

File2:(aerosun in FVM-trial/config)

# config file for aerosun builds

Testing:

# before=mpd

lammps:

Build=False

fvm:

Build=True

MPM:

Build=False

-bash-3.00$ ./make.py aerosun-pkgs

...

You need to do the following to use the build.

export LD_LIBRARY_PATH=/home/aerosun/a/schigull/FVM-trial/build-aerosun/lib:$LD_LIBRARY_PATH

export PYTHONPATH=/home/aerosun/a/schigull/FVM-trial/build-aerosun/lib:$PYTHONPATH

export PATH=/home/aerosun/a/schigull/FVM-trial/build-aerosun/bin:$PATH

OR source env.sh

-bash-3.00$ ./make.py aerosun

Configuring fvm in /home/aerosun/a/schigull/FVM-trial/build-aerosun/build/fvm : ok

Building fvm in /home/aerosun/a/schigull/FVM-trial/build-aerosun/build/fvm : ok

Installing fvm in /home/aerosun/a/schigull/FVM-trial/build-aerosun : ok

DONE

Testing:

-bash-3.00$ ./make.py --test aerosun

/home/aerosun/a/schigull/FVM-trial/tools/build/cdash.py:7: DeprecationWarning: the sets module is deprecated

from sets import Set

Testing fvm in /home/aerosun/a/schigull/FVM-trial/build-aerosun : 1 OK, 1 FAIL

Testing MEMOSA in /home/aerosun/a/schigull/FVM-trial/tests : 7 OK, 4 FAIL

----------------------------------------

8 OK, 5 FAIL

Test cases: Scripts in ~/FVM-trial/build-aerosun/bin/ same as in ~/FVM-trial/src/fvm/scripts/ and Fluent test case files in ~/FVM-trial/src/fvm/test/

-bash-3.00$ cd ~/FVM-trial/build-aerosun/bin/

1) Driven Cavity: (./testFlowModel_Jan29.py, ./testFl owModel.py)

Usage: ./testFlowModel.py filebase [outfilename]

Where filebase.cas is a Fluent case file.

Output will be in filebase-prism.dat if it is not specified.

-bash-3.00$ ./testFlowModel.py ~/FVM-trial/src/fvm/test/cav32 cav32-test.dat

2)Unsteady Cantilever: (./unsteadyCantilever.py)

Usage: ./unsteadyCantilever.py

Change filebase to ~/FVM-trial/src/fvm/src/