PyVE - Rat polyomavirus 1

Rat polyomavirus 1

Rattus norvegicus polyomavirus 1

Rattus.pdf

ATGGGAGCCGCCATTTCAGTTATTATTGATTTGATTGCTACCGCCACCGAACTGTCCACGGCGACCGGATTTACAGTTGAGGCCGTACTTAGTGGCGAGGCCCTAGCCGCCATAGAGGCCCAAGTATCAACAATTGCTACAATGGAGGGTTTAGCGGCTGAATCAGCCTTAGCTTCTATGGGGATTACACCAGAAATGTATGCCATGATAAGCACTGTCCCTCCAACAGTAGAGGGTATTATTTCTGGTGCCGCTGGGACAGCTCATATTCTTCAAACTATTGCAGGTTCAGCATCACTAACTCTAGGAGTAATCTCGGGATTTAGAGACCAACAAGTCTCTATTGTGAATAGAAACATGGCGCTGATTCCCTGGAGACCTGAAGAATATTGGGACGTGCTTTTTCCTGGTGTTAATACAATTGCTCGGGGCTTAGATGTAGCACATGGGTGGGCCCATAGTCTGTTCCAGTCTGTTAGTAGACAAATATGGAGGACACTGTTTGAGGAAACAAGAGCAGCTATAGATTATGCTGTTAGAGATGTTACTATCAGACAGACCCATAGATTACTGGATGGTGTTGCTAGAATGTTGGAAAACACTAGATGGGTGGTCACCAATGCAGTGGAACAAGGTGGGCAAATTGTATCTGATGCTGTTCAAAATACTGGTCAACTTGTACTAACCGCTCCTGGCGAGGCCTACAGAGGTCTCAGAAATTATTATGCTGAATTACCAGGTGTTAATCCGGCCCAGAGGCAGCAGATGCTGAGAACTATAGAAAGGGAAAATGCTCAGCAAGCCCTGAGGACTGAGGTGGGGCGGGATGTTCAATCAGTCACACCGTCCCCTAAGTCTTCAGGGTTTACTGAGTCTGGCAACGTTATACAGAGATACATGCCTCCTGGAGGAGCCATGCAAAGAACCTGCCCTGACTGGATGCTTCCTCTGATTCTAGGACTCTACGGAGACATAAATCCCACTTGGCATTCTGTTATTGAGGAGGAATATGGCCCCCAAAAGAAAAGGCGTCGCCTCCAGTAG

/translation="MGAAISVIIDLIATATELSTATGFTVEAVLSGEALAAIEAQVSTIATMEGLAAESALASMGITPEMYAMISTVPPTVEGIISGAAGTAHILQTIAGSASLTLGVISGFRDQQVSIVNRNMALIPWRPEEYWDVLFPGVNTIARGLDVAHGWAHSLFQSVSRQIWRTLFEETRAAIDYAVRDVTIRQTHRLLDGVARMLENTRWVVTNAVEQGGQIVSDAVQNTGQLVLTAPGEAYRGLRNYYAELPGVNPAQRQQMLRTIERENAQQALRTEVGRDVQSVTPSPKSSGFTESGNVIQRYMPPGGAMQRTCPDWMLPLILGLYGDINPTWHSVIEEEYGPQKKRRRLQ"

VP3

ATGGCGCTGATTCCCTGGAGACCTGAAGAATATTGGGACGTGCTTTTTCCTGGTGTTAATACAATTGCTCGGGGCTTAGATGTAGCACATGGGTGGGCCCATAGTCTGTTCCAGTCTGTTAGTAGACAAATATGGAGGACACTGTTTGAGGAAACAAGAGCAGCTATAGATTATGCTGTTAGAGATGTTACTATCAGACAGACCCATAGATTACTGGATGGTGTTGCTAGAATGTTGGAAAACACTAGATGGGTGGTCACCAATGCAGTGGAACAAGGTGGGCAAATTGTATCTGATGCTGTTCAAAATACTGGTCAACTTGTACTAACCGCTCCTGGCGAGGCCTACAGAGGTCTCAGAAATTATTATGCTGAATTACCAGGTGTTAATCCGGCCCAGAGGCAGCAGATGCTGAGAACTATAGAAAGGGAAAATGCTCAGCAAGCCCTGAGGACTGAGGTGGGGCGGGATGTTCAATCAGTCACACCGTCCCCTAAGTCTTCAGGGTTTACTGAGTCTGGCAACGTTATACAGAGATACATGCCTCCTGGAGGAGCCATGCAAAGAACCTGCCCTGACTGGATGCTTCCTCTGATTCTAGGACTCTACGGAGACATAAATCCCACTTGGCATTCTGTTATTGAGGAGGAATATGGCCCCCAAAAGAAAAGGCGTCGCCTCCAGTAG
/translation="MALIPWRPEEYWDVLFPGVNTIARGLDVAHGWAHSLFQSVSRQIWRTLFEETRAAIDYAVRDVTIRQTHRLLDGVARMLENTRWVVTNAVEQGGQIVSDAVQNTGQLVLTAPGEAYRGLRNYYAELPGVNPAQRQQMLRTIERENAQQALRTEVGRDVQSVTPSPKSSGFTESGNVIQRYMPPGGAMQRTCPDWMLPLILGLYGDINPTWHSVIEEEYGPQKKRRRLQ"

VP1

ATGGCCCCCAAAAGAAAAGGCGTCGCCTCCAGTAGCAAATGTGCTACAGTGTGTGGGAAACCATGTCCTAGACCAGCACCTGTGCCTAAGTTAATAATGAGGGGAGGGATAAGTGTTCTAGATTTAGTTACAGGGGAAGATAGCATAACTACAGTAGAAGCATATCTGAATCCTAGAATGGGGCAAAACAAACCTGGACAGGGAACAGAGGGGCAGTACTATGGATTTTCACAATCTATCAAAGTGAATGATTCCTTAACTGAAGACAAGGTTGCAGCCAACCAGCTGCCTTATTACAGCATGGCCAAAATCCAGCTACCAAGCCTGAATGAGGATCTGACCTGTGACACACTGCAGATGTGGGAAGCTGTTTCTGTGAAAACAGAGGTTGTGGGAGTGGGATCCCTGCTCAATGTCCATGGCTATGGCTCCAGATCACAGAGCAAGGATATAGGAATAGCATTCCCAGTAGAGGGCACTACCTACCACATGTTTGCTGTTGGCGGCGAGCCATTAGACCTTCAGGGCCTTGTACAAAATTACAATGCAAGTTATGAGGGTGATATAATCAGCATAAAAACAATTACTGGGAAGGAGATGACCTCGACCAACCAAGTGCTTGATCCCAGTGCCAAGGCAAAGCTAGACAAGGATGGGAGGTATCCTATCGAAATCTGGGGCCCTGATCCAGCTAAAAATGAGAACTCCCGGTACTTTGGCAATTTCACAGGTGGCACACAAACACCGCCTGTTATGCAGTTCACAAACACCCTAACCACAGTGTTGCTTGATGAAAATGGAGTGGGCCCCTTGTGCAAGGGGGATGGGCTGTACCTCAGTGCTGCAGATGTGATGGGTTGGTGGATCGAATACAACAGTGCAGGATGGCACTGGAGGGGGCTTCCCAGATATTTCAATGTGACATTGAGAAAAAGATGGGTGAAAAACCCATACCCTGTAACCTCCCTGCTGCAGTCATTGTACAGCAACATGCTGCCCAAAATAGAGGGGCAACCAATGGAAGGTCCCGAGGGCCAGGTGGAAGAAGTGAGAGTATATGAAGGCCAAGAACCCATCCCAGGGGATCCCGATATCAATAGATATATTGATAAATATGGGCAGCAAAGAACCAAACCTGACATTCATATGAATTGA

/translation="MAPKRKGVASSSKCATVCGKPCPRPAPVPKLIMRGGISVLDLVTGEDSITTVEAYLNPRMGQNKPGQGTEGQYYGFSQSIKVNDSLTEDKVAANQLPYYSMAKIQLPSLNEDLTCDTLQMWEAVSVKTEVVGVGSLLNVHGYGSRSQSKDIGIAFPVEGTTYHMFAVGGEPLDLQGLVQNYNASYEGDIISIKTITGKEMTSTNQVLDPSAKAKLDKDGRYPIEIWGPDPAKNENSRYFGNFTGGTQTPPVMQFTNTLTTVLLDENGVGPLCKGDGLYLSAADVMGWWIEYNSAGWHWRGLPRYFNVTLRKRWVKNPYPVTSLLQSLYSNMLPKIEGQPMEGPEGQVEEVRVYEGQEPIPGDPDINRYIDKYGQQRTKPDIHMN"

Large T-antigen

ATGGATAAGATACTTACAAAAGAAGAAAAAAGCCAATTATTGGCTCTATTGGACCTAGATGGTCAATATTGGGGGGACTTTGGTCGCATGCAAAAAGCCTACCATGCACAAAGTCTAAAATTCCATCCTGATAAAGGTGGAGACCCTCTATTAATGCAACTGCTGAATACTTTGTGGACTAAGCTCAAGCATGGGCTTCACCAAGTGAGACTTAACTTGGGAGGACATGAGGATGTTAATCCCTCTACCAGCAGACAGCCTCCTGAGCAGTTCTACAATCCCGAGACTGGACACTACTGGTCATTCTCCTACGGGTCAGCAGGCTTCAGTGAAAATCAGAAGAAGTGGTGGAAGGAGTTTTTCGAGAAGTGGGAGAGAGACCTCTATTGCAGTGAGGAGTTGGGATCATCATCCGAGGATGATACCCCTGCCCCCGCCTCCCCTATTTCTATATCCTCTAGCCCACCAGGATCTCCAAGAACACCCACCAGACCCGGGCCCAGTACCGCCCTCGAGCCCTCACCACCAAGCAGAAAGCGTGTACATGCAAATGGACCGGAGCACCATGGAAGAAAGCAGCTACGCAGAGATCAACCACCAGCACCAGGAGGAGCCAATATACCAGGAAATGGAGGGAGAGGAGCCCATATACCAGAACCTGATATCACCAATATACCTTCAGATCCTGCCGGAGGCTCCCAGTCCACCTTTGGTTCGTATTACAACTCCACAGAGGAACTGGAGACTAATGCCAGTGAGGGAGAATTCCAGTCATCCCAGACCACCCCAAAGAAACCGCCTCCTAATAGGCATACTCCTGATGATATGCCTGCTGTGCTTAGGAGCTTTGTGTCTAATGCTATATACTCTAATAAGACACAAAATAGTTTCCTGATCTATACAACAGGAGAAAAAGGAACTGTGTTATATGATAACATTGCAAAGTACAATCCAGATTTCAAGGCCTTATTTAGCTTTAAAGGTGATAGCTTGCTTTTGATAATAACACCAGGAAAACACAGAGTCAATGCTGTAAAGAGCTATTGCTGCAGATTTTGTACTGTTAGCTTCCTCCTGTGCAAAGCTGTTACTAAACCTTTGGAATGTTATAATTCTATGAGTTCTAACAGTAATGGGTTTACTCTTGTGAAAGAAAACAAGCCGGGGATTTACCAATTCGAATTCACAGATGAGAAAGAGGAAGTGAAGACGGTTGACTGGCAGTTAGTTACCCAGTTTGCTCTTGAAAATAACCTGGATGATCCCCTACTCATAATGGGACATTATTGTGAGTTTGCAAAGGATGAAACTACTTGCAGGAAGTGCAGTGAGCAAATACCTAGACTAAGGGTACATTGGAAGTACCACTCTACCCATGCTAACAATGCTGATCTATTTATCCAATGCAAACAGCAGAAATCTATATGTCAGCAAGCTGCAGACAATGTCCTTGCTAAGAAAAGGCTTAGAGTACTAGAATGCACAAGAGAAGAATTACTTGCAGACAGATTCCAGAAGTTTCTTCAAGATTTCAATGATCTAGGAAACATGGATCGGTTTATCTATCTTGCAGGAGTTGCATGGTATAATTGTCTCTTTACTAACTTTGATTCTATGCTGCTGGATATCCTGAAATTATTAACAGAAAATATCCCTAAGAAAAGAAATGTTCTGTTCAAGGGGCCTATTAACTCTGGCAAAACTAGTCTTGCTGCAGCAATTATGCACTTAGTTGGAGGTGTCTGTCTCAATGTAAACTGCCCTTCAGATAAGTTGAACTTTGAACTTGGCTGTGCAATAGATAAGTTTGCATGCTGCTTTGAAGATGTAAAGGGACAGGTAGCTAATAGAGATAGAGATAAGGACCTGCAGTCTGGAAGTGGAGTCAGCAACTTGGATAACCTTAGAGACCACCTCGATGGAAGTGTAAAAGTAAATCTGGAGAAAAAACATGTAAACAAGAGATCCCAGATATTCCCGCCTTGTATTGTTACAGCTAATGAGTATTTCTTTCCAAGAACATTACTTGCCAGGTTCCAGAATGTCTACACCTTTACTGTGCAACCACATCTGGCTCAGGCACTTGAGAAAAATCCAAGGATGAACAAATATAGGGTGTGTCAAAGTGGTCTCACCCTGTTTATGGCATTACTATGGCAGGTTCCCTCTGATTGTTTTGTCCCCTCTCTGCAAGATCCTGTTAAGGATGCTAAGAAGCTTCTGTCTGACATGTGTGGAATGACTACCTTTGCTGATATGTGCTTAAATATTGAAAATGGAGATGACCCACTTAAGGGGATTGTTGAAGAAGTGGAGGAGGCCCTTGAATGA

/translation="MDKILTKEEKSQLLALLDLDGQYWGDFGRMQKAYHAQSLKFHPDKGGDPLLMQLLNTLWTKLKHGLHQVRLNLGGHEDVNPSTSRQPPEQFYNPETGHYWSFSYGSAGFSENQKKWWKEFFEKWERDLYCSEELGSSSEDDTPAPASPISISSSPPGSPRTPTRPGPSTALEPSPPSRKRVHANGPEHHGRKQLRRDQPPAPGGANIPGNGGRGAHIPEPDITNIPSDPAGGSQSTFGSYYNSTEELETNASEGEFQSSQTTPKKPPPNRHTPDDMPAVLRSFVSNAIYSNKTQNSFLIYTTGEKGTVLYDNIAKYNPDFKALFSFKGDSLLLIITPGKHRVNAVKSYCCRFCTVSFLLCKAVTKPLECYNSMSSNSNGFTLVKENKPGIYQFEFTDEKEEVKTVDWQLVTQFALENNLDDPLLIMGHYCEFAKDETTCRKCSEQIPRLRVHWKYHSTHANNADLFIQCKQQKSICQQAADNVLAKKRLRVLECTREELLADRFQKFLQDFNDLGNMDRFIYLAGVAWYNCLFTNFDSMLLDILKLLTENIPKKRNVLFKGPINSGKTSLAAAIMHLVGGVCLNVNCPSDKLNFELGCAIDKFACCFEDVKGQVANRDRDKDLQSGSGVSNLDNLRDHLDGSVKVNLEKKHVNKRSQIFPPCIVTANEYFFPRTLLARFQNVYTFTVQPHLAQALEKNPRMNKYRVCQSGLTLFMALLWQVPSDCFVPSLQDPVKDAKKLLSDMCGMTTFADMCLNIENGDDPLKGIVEEVEEALE"

Small T-antigen

ATGGATAAGATACTTACAAAAGAAGAAAAAAGCCAATTATTGGCTCTATTGGACCTAGATGGTCAATATTGGGGGGACTTTGGTCGCATGCAAAAAGCCTACCATGCACAAAGTCTAAAATTCCATCCTGATAAAGGTGGAGACCCTCTATTAATGCAACTGCTGAATACTTTGTGGACTAAGCTCAAGCATGGGCTTCACCAAGTGAGACTTAACTTGGGAGGACATGAGGTAAGGAGGCTACCTGAAGGCGACTGGTGGCTATCAACCCGTCAAACATTTGGGGGTAATTATTCCCGTCGGCTTTGCAGAATGCCCATTACCTGTCTACAGAATAAGGCCTGTAGTACATGTAATTGCATATTATGCACTCTGAGACGCCAGCACAGAGGCCTAAAGAAAGCCTGCCTTGCTCCATGTCTAGTTCTTGGTGAATGCTACTGTCTGGATTGTTTCAGCCTGTGGTTTGGGCTGCCAATAAACAATTTCATTGTGGTCCTATATGCTGAATTTCTGGGAGACATCCCAGTGGATTGGCTGGACATTGATGTGCACCAAATCTACAACCCTGCAGTAGGATGTTAA

/translation="MDKILTKEEKSQLLALLDLDGQYWGDFGRMQKAYHAQSLKFHPDKGGDPLLMQLLNTLWTKLKHGLHQVRLNLGGHEVRRLPEGDWWLSTRQTFGGNYSRRLCRMPITCLQNKACSTCNCILCTLRRQHRGLKKACLAPCLVLGECYCLDCFSLWFGLPINNFIVVLYAEFLGDIPVDWLDIDVHQIYNPAVGC"

Middle T-antigen

ATGGATAAGATACTTACAAAAGAAGAAAAAAGCCAATTATTGGCTCTATTGGACCTAGATGGTCAATATTGGGGGGACTTTGGTCGCATGCAAAAAGCCTACCATGCACAAAGTCTAAAATTCCATCCTGATAAAGGTGGAGACCCTCTATTAATGCAACTGCTGAATACTTTGTGGACTAAGCTCAAGCATGGGCTTCACCAAGTGAGACTTAACTTGGGAGGACATGAGGTAAGGAGGCTACCTGAAGGCGACTGGTGGCTATCAACCCGTCAAACATTTGGGGGTAATTATTCCCGTCGGCTTTGCAGAATGCCCATTACCTGTCTACAGAATAAGGCCTGTAGTACATGTAATTGCATATTATGCACTCTGAGACGCCAGCACAGAGGCCTAAAGAAAGCCTGCCTTGCTCCATGTCTAGTTCTTGGTGAATGCTACTGTCTGGATTGTTTCAGCCTGTGGTTTGGGCTGCCAATAAACAATTTCATTGTGGTCCTATATGCTGAATTTCTGGGAGACATCCCAGTGGATTGGCTGGACATTGATGTGCACCAAATCTACAACCCTGCAGTAGGTAAGATGTTAATCCCTCTACCAGCAGACAGCCTCCTGAGCAGTTCTACAATCCCGAGACTGGACACTACTGGTCATTCTCCTACGGGTCAGCAGGCTTCAGTGAAAATCAGAAGAAGTGGTGGAAGGAGTTTTTCGAGAAGTGGGAGAGAGACCTCTATTGCAGTGAGGAGTTGGGATCATCATCCGAGGATGATACCCCTGCCCCCGCCTCCCCTATTTCTATATCCTCTAGCCCACCAGGATCTCCAAGAACACCCACCAGACCCGGGCCCAGTACCGCCCTCGAGCCCTCACCACCAAGCAGAAAGCGTGTACATGCAAATGGACCGGAGCACCATGGAAGAAAGCAGCTACGCAGAGATCAACCACCAGCACCAGGAGGAGCCAATATACCAGGAAATGGAGGGAGAGGAGCCCATATACCAGAACCTGATATCACCAATATACCTTCAGATCCTGCCGGAGGCTCCCAGTCCACCTTTGGTTCGTATTACAACTCCACAGAGGAACTGGAGACTAATGCCAGTGAGGGAGAATTCCAGTCATCCCAGACCACCCCAAAGAAACCGCCTCCTAATAGGCATACTCCTGATGATATGCCTGCTGTGCTTAGGAGCTTTGTGTCTAATGCTATATACTCTAATAAGACACAAAATAGTTTCCTGA

/translation="MDKILTKEEKSQLLALLDLDGQYWGDFGRMQKAYHAQSLKFHPDKGGDPLLMQLLNTLWTKLKHGLHQVRLNLGGHEVRRLPEGDWWLSTRQTFGGNYSRRLCRMPITCLQNKACSTCNCILCTLRRQHRGLKKACLAPCLVLGECYCLDCFSLWFGLPINNFIVVLYAEFLGDIPVDWLDIDVHQIYNPAVGKMLIPLPADSLLSSSTIPRLDTTGHSPTGQQASVKIRRSGGRSFSRSGRETSIAVRSWDHHPRMIPLPPPPLFLYPLAHQDLQEHPPDPGPVPPSSPHHQAESVYMQMDRSTMEESSYAEINHQHQEEPIYQEMEGEEPIYQNLISPIYLQILPEAPSPPLVRITTPQRNWRLMPVRENSSHPRPPQRNRLLIGILLMICLLCLGALCLMLYTLIRHKIVS"

195 T-antigen

ATGGATAAGATACTTACAAAAGAAGAAAAAAGCCAATTATTGGCTCTATTGGACCTAGATGGTCAATATTGGGGGGACTTTGGTCGCATGCAAAAAGCCTACCATGCACAAAGTCTAAAATTCCATCCTGATAAAGGTGGAGACCCTCTATTAATGCAACTGCTGAATACTTTGTGGACTAAGCTCAAGCATGGGCTTCACCAAGTGAGACTTAACTTGGGAGGACATGAGGTAAGGAGGCTACCTGAAGGCGACTGGTGGCTATCAACCCGTCAAACATTTGGGGGTAATTATTCCCGTCGGCTTTGCAGAATGCCCATTACCTGTCTACAGAATAAGGCCTGTAGTACATGTAATTGCATATTATGCACTCTGAGACGCCAGCACAGAGGCCTAAAGAAAGCCTGCCTTGCTCCATGTCTAGTTCTTGGTGAATGCTACTGTCTGGATTGTTTCAGCCTGTGGTTTGGGCTGCCAATAAACAATTTCATTGTGGTCCTATATGCTGAATTTCTGGGAGACATCCCAGTGGATTGGCTGGACATTGATGTGCACCAAATCTACAACCCTGCAGTAGGTAAGTATTAA

/translation="MDKILTKEEKSQLLALLDLDGQYWGDFGRMQKAYHAQSLKFHPDKGGDPLLMQLLNTLWTKLKHGLHQVRLNLGGHEVRRLPEGDWWLSTRQTFGGNYSRRLCRMPITCLQNKACSTCNCILCTLRRQHRGLKKACLAPCLVLGECYCLDCFSLWFGLPINNFIVVLYAEFLGDIPVDWLDIDVHQIYNPAVGKY"

95 T-antigen

ATGGATAAGATACTTACAAAAGAAGAAAAAAGCCAATTATTGGCTCTATTGGACCTAGATGGTCAATATTGGGGGGACTTTGGTCGCATGCAAAAAGCCTACCATGCACAAAGTCTAAAATTCCATCCTGATAAAGGTGGAGACCCTCTATTAATGCAACTGCTGAATACTTTGTGGACTAAGCTCAAGCATGGGCTTCACCAAGTGAGACTTAACTTGGGAGGACATGAGTTCTTGGTGAATGCTACTGTCTGGATTGTTTCAGCCTGTGGTTTGGGCTGCCAATAA

/translation="MDKILTKEEKSQLLALLDLDGQYWGDFGRMQKAYHAQSLKFHPDKGGDPLLMQLLNTLWTKLKHGLHQVRLNLGGHEFLVNATVWIVSACGLGCQ"

Last Revision: 4/27/2021