PyVE - Potamochoerus porcus polyomavirus 1

Potamochoerus porcus polyomavirus 1

Potamochoerus.pdf

VP2

ATGGGGTGTTATTGTTTTAGGAATGGGAGCGGCATGGGAGCACTGCTTACAATCCTAGTTGAAGTATTTGACCTAGCGGAAGTTACAGGACTCTCCGCTGAAGCTATCCTAACTGGAGAGGCCTTCACCACTGCTCAGCTACTGCAGTCACATATTGCAAACCTTGTTGAGATTGGAGGAATCTCCCTTGCAGAGGCCTTGTACGCCACAGACGTAACTCCAGAAGCCTTTGCGGCCCTGCAAGGCCTTTCACCAACCCTACCCACAGCCTTTTCAGTTGTAGCAGGAGCAGAGGGGGCGGCCGTAGGGTCTCTGGTGACCTTCTCCGCCGTTGCAGGCGCCCTCTATAATAACCCCTTTACCCATAGCACTCCAATTGCAAATCTAAATAGGGAGATGGCACTTGTACCCTACGTGGAAGATATGGACATCCTGTTCCCTGGTGTACAGGAGTTCACAAGATTCATATTCAACATAGATCCACTTCGGTGGGCACAGAACATGTATTCATTTGCTGGGCGGTACCTCTGGAATACTGTGCTTATGGAGAGCAGGCGGCAAATAGCCCACCACACAACTGAACTGGCAACCAGGACAGCTAGTGGAATCCAGCATAGCTTGGCAAACTTCTTTGAAAATGCAAGATGGGCTGTATCTAACCTAGGGAGCAACATCTATACTGGGCTTCAGGGCTACTACAGGGAACTCCCCGGCCTAAATCCCCCACAGGCGAGGGCCCTTGCCAGGCGCCTGGGGGTGGAACAGCCTGACAGATACCAGCTAGAGGCGGGTGGAGGCGGAAGGCCTAGTGATAAACCCAAGACACAGCCTGTGTCTGCAGAGTATGTGGAGAAATATCCCCCCCCTGGTGGGGCAGGACAAAGGGTTGCCCCTGATTGGATGCTGCCTCTTCTTCTAGGCCTGTACGGAGACCTTAACCCTACCTGGAAAGCAGCAATAGAGGTCAAGGAGCAGGATGAGCCCCCCAAAAAGAGGACAAAAGCCACGCCCAGACCCAGTGCCAAAACTACTAATAAAAGGAGGGATAGAAGTGCTAGGTCTGCGAACCGGACCAGATAG

/translation="MGCYCFRNGSGMGALLTILVEVFDLAEVTGLSAEAILTGEAFTTAQLLQSHIANLVEIGGISLAEALYATDVTPEAFAALQGLSPTLPTAFSVVAGAEGAAVGSLVTFSAVAGALYNNPFTHSTPIANLNREMALVPYVEDMDILFPGVQEFTRFIFNIDPLRWAQNMYSFAGRYLWNTVLMESRRQIAHHTTELATRTASGIQHSLANFFENARWAVSNLGSNIYTGLQGYYRELPGLNPPQARALARRLGVEQPDRYQLEAGGGGRPSDKPKTQPVSAEYVEKYPPPGGAGQRVAPDWMLPLLLGLYGDLNPTWKAAIEVKEQDEPPKKRTKATPRPSAKTTNKRRDRSARSANRTR"

VP3

ATGGCACTTGTACCCTACGTGGAAGATATGGACATCCTGTTCCCTGGTGTACAGGAGTTCACAAGATTCATATTCAACATAGATCCACTTCGGTGGGCACAGAACATGTATTCATTTGCTGGGCGGTACCTCTGGAATACTGTGCTTATGGAGAGCAGGCGGCAAATAGCCCACCACACAACTGAACTGGCAACCAGGACAGCTAGTGGAATCCAGCATAGCTTGGCAAACTTCTTTGAAAATGCAAGATGGGCTGTATCTAACCTAGGGAGCAACATCTATACTGGGCTTCAGGGCTACTACAGGGAACTCCCCGGCCTAAATCCCCCACAGGCGAGGGCCCTTGCCAGGCGCCTGGGGGTGGAACAGCCTGACAGATACCAGCTAGAGGCGGGTGGAGGCGGAAGGCCTAGTGATAAACCCAAGACACAGCCTGTGTCTGCAGAGTATGTGGAGAAATATCCCCCCCCTGGTGGGGCAGGACAAAGGGTTGCCCCTGATTGGATGCTGCCTCTTCTTCTAGGCCTGTACGGAGACCTTAACCCTACCTGGAAAGCAGCAATAGAGGTCAAGGAGCAGGATGAGCCCCCCAAAAAGAGGACAAAAGCCACGCCCAGACCCAGTGCCAAAACTACTAATAAAAGGAGGGATAGAAGTGCTAGGTCTGCGAACCGGACCAGATAG

/translation="MALVPYVEDMDILFPGVQEFTRFIFNIDPLRWAQNMYSFAGRYLWNTVLMESRRQIAHHTTELATRTASGIQHSLANFFENARWAVSNLGSNIYTGLQGYYRELPGLNPPQARALARRLGVEQPDRYQLEAGGGGRPSDKPKTQPVSAEYVEKYPPPGGAGQRVAPDWMLPLLLGLYGDLNPTWKAAIEVKEQDEPPKKRTKATPRPSAKTTNKRRDRSARSANRTR"

VP1

ATGAGCCCCCCAAAAAGAGGACAAAAGCCACGCCCAGACCCAGTGCCAAAACTACTAATAAAAGGAGGGATAGAAGTGCTAGGTCTGCGAACCGGACCAGATAGCACAACAACCATTGAGCTCTTTCTAAACCCACGGATGGGTCAGTCCCCCCAATCAGACTACTATGGATTCAGTGATAACCAGAGAGGCGCTACATCAAGGGAAAACGAGGAACTCATCAATGAGGAGCTTCCAAGATATAGCCTTGGTGTAGTACAGCTCCCCATGCTTAATGAGAATCTCACAGATGGGGTCATAATGATGTGGGAGGCAGTAAGCTGCAAGACAGAGGTGGTGGGTATAAACACCCTAACCACCTGCCATGGGTTCAAAAAGAGGTTTAACCCAGACCCAGGCCACGGCGCAGCCATGCCTATAGAGGGTGTAAATTACCACTTCTTTGCAGTGGGCGGGGAGCCCCTAGAGCTGCAGTTCATCTGTGAAGATTACAAAGCCCCCTACCATGCGGAGGCTGTAAAGATACCTCCCAAGGAGAAAATCACTAATAAGGCACAAGTACTAGACCCAACCCTTAAGGGGATACTGGACAAGGATGGCTGGTATCCTGTGGAATGTTGGTGCCCTGACCCCAGCAAGAATGAAAACACCCGTTACTTTGGAACCTACACGGGAGGGATTCAAACCCCCCCGGTGCTCCAGTTCACCAATTCTGTCACAACAATTCTGCTGGATGAGAATGGAGTGGGCCCACTGTGCAAGGGGGATAAGCTTTATGTCTCCGCCGCTGATATCTGTGGATTCCTGACCCAGCCCAATGACATGCAGCAGTTCCGTGGTCTGCCTAGATACATGTCTGTGACCCTGCGGAAAAGACTTGTGAAGAACCCCTACCCCATTTCCAGTCTGCTTAATACTATATTTAATCAATCCCTCCCACTGATGGATGGTCAGAAAATGGAGGAGCAGGTAGAGGAGGTCAGGGTGTATCAGGGGGTGGAGGAACTGCCGGGGGACCCTGACATGGTGAGGTTTATTAATAGGTTTGGACAGGAGGAGTCAAGGATTCCACACAATTGA

/translation="MSPPKRGQKPRPDPVPKLLIKGGIEVLGLRTGPDSTTTIELFLNPRMGQSPQSDYYGFSDNQRGATSRENEELINEELPRYSLGVVQLPMLNENLTDGVIMMWEAVSCKTEVVGINTLTTCHGFKKRFNPDPGHGAAMPIEGVNYHFFAVGGEPLELQFICEDYKAPYHAEAVKIPPKEKITNKAQVLDPTLKGILDKDGWYPVECWCPDPSKNENTRYFGTYTGGIQTPPVLQFTNSVTTILLDENGVGPLCKGDKLYVSAADICGFLTQPNDMQQFRGLPRYMSVTLRKRLVKNPYPISSLLNTIFNQSLPLMDGQKMEEQVEEVRVYQGVEELPGDPDMVRFINRFGQEESRIPHN"

Large T-antigen

ATGGAATTGTCACCTGAGGAATGTGAGGAGCTGCAGGGCTTGCTTGGCATTGCGGACATAGGCAATAAGGAGGAGCTGAAAAAAGCTTTCCTAAAGGCATGCAAGGTGCATCATCCAGACAAAGGTGGGGATGAAAATGCAATGAAACGGCTGCTATTCCTCTACAATAAAGCAAAGCAAAGCAGCAGCCCCAGCTGGAATGGAACCCAGGTTCCGGAGTATGGAACAAGTCAGTGGGACAAATGGTGGGAGAACTTCAATGAGCAGGACCTGCATTGTGATGAAGAGTTCGAGCCATCAGATGAAGACAGCCCCCAGGAGGGTCCCACCGCGAGTCAGGCAACACCGCCAAAGGCTAAGAGAAGCAGGACCACTCCCCAGTTCCCCGAAGAACTTAAGGACTATGTAAGCAATGCACTGTTCAGCAATAGAACATATAATTGCTTTGTAGTGTACACCACCGGGGAGAAGGGAAAGGAATTGTATCCATGTATCCTCTCCGTCTACAAATGCACATTCCTGGGCCTCTTTAATTACAGGGGGGATGCGCTTCTGTATGCCGTGACCCCGGGCAAGCATAGGGTGAATGCCATAGAGCATCTGTGCAGCAAAAAATGTGTGGTTAGCTTTGTGCAGGTAAAGGGGGTTCTCAAGCCCCATGAAGCCTACAAGGCATGCTGCCAGGACCCATTTGAGATGGTGCAGCAGAATATAGAGGGTGGTCTGCCTTCCAGCTTCTTTAATCCCCACGAGGAGGAGGACAAAGGGGTTAATTGGAAATTAGTGGCAGAGTTTGCCTGTGACGTGAAATGCACGGACCCCCTGTTACTAATGGCTCTGTACCTGGAATTTGTTACCCCCCCTAGTGTTTGCAAGGTGTGTGACAATCCTAGGCGCCAACAACATAGGCGGCACCACAGCAAAGATCACCATAACAATGCTGTACTTTTCCAGGATAGCAAGACCCAAAGGACCATATGTGCCCAGGCGTGCGACCTGGTCATGGCCAAGAGAAGGCTCAACTGCAAAACAATGACTAGGCAGGAGTTATTGGAGCAGCGCTGGGAGGAGCTCTTTGAGGAGATGGAGGACATATTTGGAGCCAGAGGGGAGGAACACCTGGCCCACAGAATGGCCGCAGTGATGTGGATAAGTGCCCTACATGAGGACATGCCAGACATCACATTCAATTACCTTAAAATGGTGGTTGGAAATAAACCTAAACAGAGGTATCTGTTGCTGAGAGGGCCAGTTAACTGTGGTAAGACAACTGTGGCGGCGGGTCTGGTGTCCTTATGTGGAGGGGCGTATCTCAATATCAACTGCCCTCCAGAAAGGTTGGCCTTTGAGCTGGGGATGGCAATTGACCAGTTTACAGTAGTATTTGAGGACGTGAAGGGAAAATCCCCAAGCTCATTACCTCCAGGGCTGGGCCTGGAGAATTTAGATAATCTTAGAGATCATCTAGATGGGGCAGTACCGGTCAACCTTGAGAGAAAGCATCAAAACAAGGTCACCCAGATCTTTCCCCCAGGCATTGTTACCTGTAATGAGTATGATCTGCCCTTAACAACCAAAATCAGAATGCACCAGAGAGTTAATCTGAAACATAGCCCCAACCTTCATAGGAGTCTAAGGAAAACAGAGGAGGTTGGCAGGAACAGGTATTTACAGAGTGGCATAACCTGGTTATTAATGTTAATATATCACAGGGAGGTGGCTGAGTTCACAGAGAAACTGCAGAAGAAGGTGGTGGAATGGAAAGAAAGGATAGATAAGGAGGTGGGGGAGGCGTGGCTCTACACCATGAGGGAGAATATAGAGAAGGGCAACAATATTCTGCAGAAATGA

/translation="MELSPEECEELQGLLGIADIGNKEELKKAFLKACKVHHPDKGGDENAMKRLLFLYNKAKQSSSPSWNGTQVPEYGTSQWDKWWENFNEQDLHCDEEFEPSDEDSPQEGPTASQATPPKAKRSRTTPQFPEELKDYVSNALFSNRTYNCFVVYTTGEKGKELYPCILSVYKCTFLGLFNYRGDALLYAVTPGKHRVNAIEHLCSKKCVVSFVQVKGVLKPHEAYKACCQDPFEMVQQNIEGGLPSSFFNPHEEEDKGVNWKLVAEFACDVKCTDPLLLMALYLEFVTPPSVCKVCDNPRRQQHRRHHSKDHHNNAVLFQDSKTQRTICAQACDLVMAKRRLNCKTMTRQELLEQRWEELFEEMEDIFGARGEEHLAHRMAAVMWISALHEDMPDITFNYLKMVVGNKPKQRYLLLRGPVNCGKTTVAAGLVSLCGGAYLNINCPPERLAFELGMAIDQFTVVFEDVKGKSPSSLPPGLGLENLDNLRDHLDGAVPVNLERKHQNKVTQIFPPGIVTCNEYDLPLTTKIRMHQRVNLKHSPNLHRSLRKTEEVGRNRYLQSGITWLLMLIYHREVAEFTEKLQKKVVEWKERIDKEVGEAWLYTMRENIEKGNNILQK"

Hypothetical Protein

ATGTCTTTGCAACGGGTGTGGTGCAGCCTGCGAAGACATCTTAAGAGCAACAGACTGCTAATGTGCAAAATTCTGATGGAGTTGCTTAAGATGCTTGTGGAACTTTTGGACCGGGGGGACTATGTGGACGGGGAGGGACAATTCTCTGTGGATGACCTAGATGCATGTGTTGAATACATACAAAGGCTAGCGCAGCAGGCAGAGGCAGAGGAAACCACAGGGGAAGTTACTCAGGAAACCGGCGCAGGTGCTTGCGCAAAGCAGGCACCAGATGAGTCATATGAGTTTCCGGAGCTAATAGCAACCTACCTAGCCTCCTGCCTCTCACTCTGCCTGAAAGCGGCGCGGGAAACCACCGAGAAGGGGCGGAAACAGGGCGCGCGCGGCAAATTCAAACAGTAA

/translation="MSLQRVWCSLRRHLKSNRLLMCKILMELLKMLVELLDRGDYVDGEGQFSVDDLDACVEYIQRLAQQAEAEETTGEVTQETGAGACAKQAPDESYEFPELIATYLASCLSLCLKAARETTEKGRKQGARGKFKQ"

ALTO

ATGGAACAAGTCAGTGGGACAAATGGTGGGAGAACTTCAATGAGCAGGACCTGCATTGTGATGAAGAGTTCGAGCCATCAGATGAAGACAGCCCCCAGGAGGGTCCCACCGCGAGTCAGGCAACACCGCCAAAGGCTAAGAGAAGCAGGACCACTCCCCAGTTCCCCGAAGAACTTAAGGACTATGTAA

/translation="MEQVSGTNGGRTSMSRTCIVMKSSSHQMKTAPRRVPPRVRQHRQRLREAGPLPSSPKNLRTM"

Small T-antigen

ATGGAATTGTCACCTGAGGAATGTGAGGAGCTGCAGGGCTTGCTTGGCATTGCGGACATAGGCAATAAGGAGGAGCTGAAAAAAGCTTTCCTAAAGGCATGCAAGGTGCATCATCCAGACAAAGGTAAAAAGGGGCACAGCTGCAGCAGGCGGGCGGGGGGGCGCATGCATTATCTAAGGGATGCATATATATGCAGGTGGGGATGA

/translation="MELSPEECEELQGLLGIADIGNKEELKKAFLKACKVHHPDKGKKGHSCSRRAGGRMHYLRDAYICRWG"

Last Revision: 5/6/2021

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