PyVE - Budgerigar fledgling disease virus

Budgerigar fledgling disease virus

Budgerigar.pdf

VP2

ATGGGAGCTATCATTTCGGCTATAGCTGGTCTGTTCGAACTAGGAGCATTGGGTGGCCTAGCAGTAGATGCTGCCGTAAATACAGCAGAAATAGAAGCATTCATAGGGGAATTGGTACTGCAGGACTTTAGCGTTGCTGAAATATTCGACGCTATAGAAACAAGTGGTATACCTTTAGCGAATACCGCTGTACCTGTTGCAGAGCTACAGCAAACAGCAGCAACTTCCGGGTTGATTGGACAGGCGCTAAGTGCCCCATCCCTGATAGCGGCGTCAGTCAAGGCCTTTGCAGGAGACCCCGTCGCAGCCGGCAACAATATGGCCCTACAGGTCTGGAGAGACCAAATGGACATACTCTTTCCAGGAGCGGAATGGTTCTCGAATGCTGTACATAATATCAATCCATTAGCATGGGCCCAATCGTTGTATGAACAAGTAGGCCAAAGTATATGGAACTATATGACAGGTAACATTGGGCAAGCTGTAATACATCAAATCGAGGAGCGTACAACAGCCCTGATTGTGTACCAAAGTAGGGGTATATATGATATACTTGCTAGAGCGTTAGAAACCGCACGTTGGACATTAACAACAGCGGCCGTAGATACATATCAGACACTAAAAAGCTACTATGGTGAGCTACCGGCTGTGTCGGGCAGAGTTGAGGCCTTTCGTAGGTATCACGAGGTCGCACAAGGACGTAGCTTCTTTGAGGACTCAGATATACAAGATGTATTAGAGGGTAAAAAGGCCCAAAAACGAATTGAGGGCCCACAGGAGATGACAGGCCAAACCATAGAACAGCAAACCCCCCCAGGAGGTGCAATGCAACGACATGCAAATGACTGGTTACTCCCTTTGATTCTAGGTCTCTACGGGGACCTGACTCCAGAGTGGCGGTACCAGCTTAAGGAAAGGCTCAATGTCCCAAAAAGGAAAAGGAAGCTGCCCACGACCTCAGCAGGTACCTCGCCTCCTAGTAAAAGGAGGTATAGAGGTGTTAGACGTAAAGTCAGGTCCAGATAG

/translation="MGAIISAIAGLFELGALGGLAVDAAVNTAEIEAFIGELVLQDFSVAEIFDAIETSGIPLANTAVPVAELQQTAATSGLIGQALSAPSLIAASVKAFAGDPVAAGNNMALQVWRDQMDILFPGAEWFSNAVHNINPLAWAQSLYEQVGQSIWNYMTGNIGQAVIHQIEERTTALIVYQSRGIYDILARALETARWTLTTAAVDTYQTLKSYYGELPAVSGRVEAFRRYHEVAQGRSFFEDSDIQDVLEGKKAQKRIEGPQEMTGQTIEQQTPPGGAMQRHANDWLLPLILGLYGDLTPEWRYQLKERLNVPKRKRKLPTTSAGTSPPSKRRYRGVRRKVRSR"

VP3

ATGGCCCTACAGGTCTGGAGAGACCAAATGGACATACTCTTTCCAGGAGCGGAATGGTTCTCGAATGCTGTACATAATATCAATCCATTAGCATGGGCCCAATCGTTGTATGAACAAGTAGGCCAAAGTATATGGAACTATATGACAGGTAACATTGGGCAAGCTGTAATACATCAAATCGAGGAGCGTACAACAGCCCTGATTGTGTACCAAAGTAGGGGTATATATGATATACTTGCTAGAGCGTTAGAAACCGCACGTTGGACATTAACAACAGCGGCCGTAGATACATATCAGACACTAAAAAGCTACTATGGTGAGCTACCGGCTGTGTCGGGCAGAGTTGAGGCCTTTCGTAGGTATCACGAGGTCGCACAAGGACGTAGCTTCTTTGAGGACTCAGATATACAAGATGTATTAGAGGGTAAAAAGGCCCAAAAACGAATTGAGGGCCCACAGGAGATGACAGGCCAAACCATAGAACAGCAAACCCCCCCAGGAGGTGCAATGCAACGACATGCAAATGACTGGTTACTCCCTTTGATTCTAGGTCTCTACGGGGACCTGACTCCAGAGTGGCGGTACCAGCTTAAGGAAAGGCTCAATGTCCCAAAAAGGAAAAGGAAGCTGCCCACGACCTCAGCAGGTACCTCGCCTCCTAGTAAAAGGAGGTATAGAGGTGTTAGACGTAAAGTCAGGTCCAGATAG

/translation="MALQVWRDQMDILFPGAEWFSNAVHNINPLAWAQSLYEQVGQSIWNYMTGNIGQAVIHQIEERTTALIVYQSRGIYDILARALETARWTLTTAAVDTYQTLKSYYGELPAVSGRVEAFRRYHEVAQGRSFFEDSDIQDVLEGKKAQKRIEGPQEMTGQTIEQQTPPGGAMQRHANDWLLPLILGLYGDLTPEWRYQLKERLNVPKRKRKLPTTSAGTSPPSKRRYRGVRRKVRSR"

VP1

ATGTCCCAAAAAGGAAAAGGAAGCTGCCCACGACCTCAGCAGGTACCTCGCCTCCTAGTAAAAGGAGGTATAGAGGTGTTAGACGTAAAGTCAGGTCCAGATAGTATAACAACCATAGAGGCATACCTTCAACCGCGGCCTGGACAAAAAAATGGATACTCCACAGTAATAACAGTGCAGGCAGAAGGATACCAGGATGCCCCCCACAGCACAGAGGTACCGTGTTACAGCTGTGCCAGGATACCGCTCCCCACGATCAACGACGACATTACGTGCCCGACCCTGCTTATGTGGGAGGCTGTCAGTGTTAAAACTGAGGTTGTTGGAGTGTCTAGTATTCTCAACATGCATTCTGGGGCTTTCCGCGCATTTAACGGATACGGGGGAGGCTTTACTATTTGTGGCCCTAGGATCCATTTCTTTAGCGTGGGTGGAGAGCCTCTCGATTTACAGGCATGTATGCAAAATTCAAAAACTGTGTACCCTGCACCCCTAATTGGGCCTGGGGAAGGAGAACGACGTGAAACAGCACAGGTTCTCGATACGGGCTACAAGGCCCGACTAGATAAGGATGGTCTCTACCCCATTGAGTGCTGGTGCCCAGACCCTGCTAAGAATGAGAACACTAGATATTATGGCAACCTCACAGGTGGGCCTGAGACCCCCCCTGTACTTGCCTTCACAAACACTACAACGACAATTCTCCTTGATGAAAATGGGGTTGGACCCCTATGCAAGGGCGATGGCTTGTTCCTCTCAGCTGCAGATGTGGCAGGTACCTACGTTGACCAACGTGGCCGCCAATATTGGCGAGGCCTACCACGCTATTTCAGTATCCAGCTGAGGAAACGTAATGTTCGTAACCCCTATCCTGTATCTGGTTTGCTAAACTCCTTGTTCAATGACCTGATGCCCCGTATGACTGGTCAAAGCATGCAGGGCTCTGATGCACAGGTGGAGGAGGTTCGTGTGTATGAGGGTATGGAAGGGCTGGCTCCCGAGATTGACATGCCCCCCAAAGCTCCCCGCTAA

/translation="MSQKGKGSCPRPQQVPRLLVKGGIEVLDVKSGPDSITTIEAYLQPRPGQKNGYSTVITVQAEGYQDAPHSTEVPCYSCARIPLPTINDDITCPTLLMWEAVSVKTEVVGVSSILNMHSGAFRAFNGYGGGFTICGPRIHFFSVGGEPLDLQACMQNSKTVYPAPLIGPGEGERRETAQVLDTGYKARLDKDGLYPIECWCPDPAKNENTRYYGNLTGGPETPPVLAFTNTTTTILLDENGVGPLCKGDGLFLSAADVAGTYVDQRGRQYWRGLPRYFSIQLRKRNVRNPYPVSGLLNSLFNDLMPRMTGQSMQGSDAQVEEVRVYEGMEGLAPEIDMPPKAPR"

Large T-antigen

ATGGCTTCTTTGCGCAGATTGACCGAGCTCCTGTGCCTACCTGTAACCGCAACGGCTGCAGATATCAAGACTGCCTATCGTCGCACGGCACTGAAGTACCATCCCGACAAAGGAGGGGATGAGGAAAAGATGAAGGAATTGAATACCCTCATGGAGGAATTCCGTGAGACCGAAGGCCTACGTGCAGATGAGACCCTAGAGGACTCCGATCCCGAACCTGAAGAGAGCGGCTATGCTACCTTCGAGAATGGCACCGAACCTCAAACAACTCAGGATGACAACCCTCAGGATAGTCAGTATAGCACACCCCCAAAAAGGGGTACCACCGACTATGAGCTACCCCCAGAGGTAGATGCTTATTTACTAACCCCACGCTCCGTGCAGAGCTGCCCTGATTGCCACTTGCTTATTACCTCAATTACCAAAATGCCGCAACTTAAGGCCCACCTTTATGAGCACTTCGGGATAAAGGGACATATGCTTGCGCATTGGACTGGGATCGCGTTGCTCGTGCTTCAGCTAGAAAAACCGACGCGTATATCGACGGTGCATAACTTTTGCAAAAAATACTGTACCATTTCGATATGTTCTGTACGTGGTATTAAAAAGAATTGTGTTCATGCTCTTATTAAAACCCTGCTAGATGTGCCAGGCCTGGACCTGGAGGAATGCAGTATTGATATGAATGTTGTGGACGAAAAGCAATTTATGCATGCAATGTTATATGACTATGCAGTACAAATTGACTGTACCGATGCCCTATTGTTACTTGCAATATATAAACGATTAGCACAGCCCACCGATAAGTGTCCCGAGTGCCAGAAGGACAAGGACACGGTGAAGCGCAAGAGGTCGACACATATCGACGACCACCCACGACACCAGCACAACGCCTCACTATTTCTGCACATCAAGGATCAAAAACGCCTATGCCAATGTGCTGTGGATGCTGTGCTTGCAGAAAAACGTTTCCGGTCAGCGACCATGACAAGGGATGAGCGTCTCAAAGAACGCTTCCGGACTGTGCTACGTAACATTCAGGAACTCTTAGATGGTGAAACTGAGGCAATTGATGATTTTGTAACAGCTATACTGTTGTTCAATATGTTATTTCCAGATGTTGATGTGATTGTTGATATATTGCAGACAATGGTGAAAAACCCACCGAAGCGGCGATACTATATATTTAAAGGTCCAGTGAATACGGGTAAGACCACCGTGGCTGCTGCCATACTGGCACTGTGTACAGGGGCATCCCTGAATGTAAATGGCACCCCTGATCGACTGCAATTCGAACTAGGATGCGCTATCGATCAGTTCATGGTTCTGTTCGAGGACGTTAAAGGTACACCTGAACCAGACACAAACCTGCCTTCAGGCTTTGGTATGGTAAACCTCGATAATCTGCGAGATCATCTCGAAGGTAGTGTACCCGTAAACCTCGAACGGAAACACCAAAATAAGGTGTCACAAATATTTCCTCCAGGAATCATTACCATGAATAATTATGTATTGCCACATACCATACAGGCACGCGCCCGTACTTTGGTTAACTTTAAGCATATTAAAGTGTATGCCAAGGCGCTCCGTAATAACATTAGTGTGCTGGAGCAGCGCCTAATAACGAAGCCGGAAACCCTCTTGGCATACCTATTGATTAGGCCCGAAAGTGAAAAGGAGATCAGCGCCGATCTCAGGGCCGAATTTCTAACGGTAATTGAAAACCTTAAGTTCGAAGTGGACGAACGTTTCTTCCAATATAATAATAGACTGCACGAAGGCTTATGCGTTCATGAATAG

/translation="MASLRRLTELLCLPVTATAADIKTAYRRTALKYHPDKGGDEEKMKELNTLMEEFRETEGLRADETLEDSDPEPEESGYATFENGTEPQTTQDDNPQDSQYSTPPKRGTTDYELPPEVDAYLLTPRSVQSCPDCHLLITSITKMPQLKAHLYEHFGIKGHMLAHWTGIALLVLQLEKPTRISTVHNFCKKYCTISICSVRGIKKNCVHALIKTLLDVPGLDLEECSIDMNVVDEKQFMHAMLYDYAVQIDCTDALLLLAIYKRLAQPTDKCPECQKDKDTVKRKRSTHIDDHPRHQHNASLFLHIKDQKRLCQCAVDAVLAEKRFRSATMTRDERLKERFRTVLRNIQELLDGETEAIDDFVTAILLFNMLFPDVDVIVDILQTMVKNPPKRRYYIFKGPVNTGKTTVAAAILALCTGASLNVNGTPDRLQFELGCAIDQFMVLFEDVKGTPEPDTNLPSGFGMVNLDNLRDHLEGSVPVNLERKHQNKVSQIFPPGIITMNNYVLPHTIQARARTLVNFKHIKVYAKALRNNISVLEQRLITKPETLLAYLLIRPESEKEISADLRAEFLTVIENLKFEVDERFFQYNNRLHEGLCVHE"

Small T-antigen

ATGGCTTCTTTGCGCAGATTGACCGAGCTCCTGTGCCTACCTGTAACCGCAACGGCTGCAGATATCAAGACTGCCTATCGTCGCACGGCACTGAAGTACCATCCCGACAAAGGAGGGGATGAGGAAAAGATGAAGGAATTGAATACCCTCATGGAGGAATTCCGTGAGACCGAAGGCCTACGTGCAGATGAGACCCTAGAGGACTCCGATCCCGAACCTGAAGAGAGCGGCTATGCTACCTTCGAGAATGTAAGTGTACCCGATATCGATGGGGCCTTCTTTAAACTCATGAAACTGAAAAAGTGCATGCAAACCTATTTTAGCGTTAACGAGAGACGCAAACAGGATATAAGGCCTGAATATTTCGAGCTGTTTAAGGCCTTCCAAGATGTACCATGGAAGGTACTGGAGGACTTTTTTACAAGTGAAATGTTCTAA

/translation="MASLRRLTELLCLPVTATAADIKTAYRRTALKYHPDKGGDEEKMKELNTLMEEFRETEGLRADETLEDSDPEPEESGYATFENVSVPDIDGAFFKLMKLKKCMQTYFSVNERRKQDIRPEYFELFKAFQDVPWKVLEDFFTSEMF"

Agnoprotein 1a

ATGTCTACTCCAGCGCGAGATCCAAACACGGCGGGCACTGCGGCCCTTAGCCCGTTTAGCACTCCGAATCACGAGCTGCGCGCACCAGGGCCTGGAGAGGCTCATTCGCCTTTTACACCTACTGCTGCACCTGGGTCGCAGCCTGCTGGATCTCTTTCAGACCCTGAGGACGGCCCTGACCCAACCTTCAACTTCTATATTCAGGGACATCGGCGCCGTCCCTATGACCGTCAGAACCGCTTCGGGAAACTAGAAAGCGAGATTCGGGAAACCAAATCCCAATTGGAGACCCTGCGCCAGGAATTAAAGCATCTGCAGGCAGACGTAGATGATCTGAAGGAGACAGTGTATGCGGCAGGCACTAGCACGGCAAGCACTTCTGTCCCTCCTTCACAGCCTAACTCGCCTACCCCTACTGCTACCACCCCTGAGGCTTCTCCTGCTGCTCCTACTACCGAGTCCACCGAGACAACCGGCCCTAGCGTCGCGACTAACGCAACCGAACCGTCCGAATCGCGGCCGGCTCGCTAA

/translation="MSTPARDPNTAGTAALSPFSTPNHELRAPGPGEAHSPFTPTAAPGSQPAGSLSDPEDGPDPTFNFYIQGHRRRPYDRQNRFGKLESEIRETKSQLETLRQELKHLQADVDDLKETVYAAGTSTASTSVPPSQPNSPTPTATTPEASPAAPTTESTETTGPSVATNATEPSESRPAR"

Agnoprotein 1b

ATGTCTACTCCAGCGCGAGATCCAAACACGGCGGGCACTGCGGCCCTTAGCCCGTTTAGCACTCCGAATCACGAGCTGCGCGCACCAGGGCCTGGAGAGGCTCATTCGCCTTTTACACCTACTGCTGCACCTGGGTCGCAGCCTGCTGGATCTCTTTCAGACCCTGAGGACGGCCCTGACCCAACCTTCAACTTCTATATTCAGCCTAACTCGCCTACCCCTACTGCTACCACCCCTGAGGCTTCTCCTGCTGCTCCTACTACCGAGTCCACCGAGACAACCGGCCCTAGCGTCGCGACTAACGCAACCGAACCGTCCGAATCGCGGCCGGCTCGCTAA

/translation="MSTPARDPNTAGTAALSPFSTPNHELRAPGPGEAHSPFTPTAAPGSQPAGSLSDPEDGPDPTFNFYIQPNSPTPTATTPEASPAAPTTESTETTGPSVATNATEPSESRPAR"

Agnoprotein 2a

ATGCCTAACGGAACGCCTACCCTAAACAGGCCCTTAGCCCGTTTAGCACTCCGAATCACGAGCTGCGCGCACCAGGGCCTGGAGAGGCTCATTCGCCTTTTACACCTACTGCTGCACCTGGGTCGCAGCCTGCTGGATCTCTTTCAGACCCTGAGGACGGCCCTGACCCAACCTTCAACTTCTATATTCAGCCTAACTCGCCTACCCCTACTGCTACCACCCCTGAGGCTTCTCCTGCTGCTCCTACTACCGAGTCCACCGAGACAACCGGCCCTAGCGTCGCGACTAACGCAACCGAACCGTCCGAATCGCGGCCGGCTCGCTAAGTAG

/translation="MPNGTPTLNRPLARLALRITSCAHQGLERLIRLLHLLLHLGRSLLDLFQTLRTALTQPSTSIFSLTRLPLLLPPLRLLLLLLLPSPPRQPALASRLTQPNRPNRGRLAK"

Agnoprotein 2b

ATGCCTAACGGAACGCCTACCCTAAACAGGCCCTTAGCCCGTTTAGCACTCCGAATCACGAGCTGCGCGCACCAGGGCCTGGAGAGGCTCATTCGCCTTTTACACCTACTGCTGCACCTGGGTCGCAGCCTGCTGGATCTCTTTCAGACCCTGAGGACGGCCCTGACCCAACCTTCAACTTCTATATTCAGGGACATCGGCGCCGTCCCTATGACCGTCAGAACCGCTTCGGGAAACTAG

/translation="MPNGTPTLNRPLARLALRITSCAHQGLERLIRLLHLLLHLGRSLLDLFQTLRTALTQPSTSIFRDIGAVPMTVRTASGN"

Last Revision: 5/5/2021