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The R-INLA project
The home of the R-INLA project
A. The SPDE book
Barrier Models
Books
Contact us, stay updated, get help or report an error
Discussion forum
Download
Examples and tutorials
Case studies and code from papers
Blangiardo et al (2012)
Breslow and Clayton (1993)
Cameletti et al (2012)
Cosandey-Godin, Krainski, Worm, and Mills Flemming (2014)
Diggle, Menezes and Su (2010)
Realdata
Simulation1
Simulation2
Ferkingstad-2017
Guo and Carlin (2004)
Lenzi, Castruccio, Rue and Genton (2019)
Lindgren, Rue and Lindstrom, RSS-paper, 2011
Martino and Rue (2010)
Code for Survival Example
Code for the Zambia Example
Martino, Akerkar and Rue (2010)
Leukemia in North East England example
Muff, Riebler, Held, Rue and Saner (2014)
Opitz, Huser, Bakka, Rue (2018)
Papoila et al. (2013)
PC-priors (Simpson et al (2014, 2015, 2016))
Ruiz-Cardenas, Krainski and Rue (2010)
Simpson, Illian, Lindgren, Sørbye and Rue (2016) [Going off grid: LGCP]
Sørbye, Illian, Simpson, Burslem and Rue (2018)
Van Niekerk and Rue (2020) - PC prior for the Weibull model
Van Niekerk, Bakka and Rue (2019) - Competing risks joint models
Van Niekerk, Bakka and Rue (2020) - Stable non-linear generalized Bayesian joint models for survival-longitudinal data
N-Mixture models
Small tutorials by Haakon Bakka
Tutorials
SPDE-tutorial
SPDE-tutorial from the ISBA Bulletin
SPDE-tutorial in Journal of Statistical Software 2015
Tutorial on option 'scale.model'
Volume I
Code for Bym example
Code for Drivers example
Code for Epil example
Code for Munich example
Code for Salm example
Code for Scotland example
Code for Seeds example
Code for Surg example
Code for Tokyo example
Code for Zambia example
Volume II
Bivariate meta-analysis of sensitivity and specificity
Code for alli example
Code for model B of salamander data
Code for Stochvol example
FAQ
Help
Internal use
Models
Latent models, likelihoods and priors.
Tools to manipulate models and likelihoods
News
"A gentle INLA tutorial"....
"Bayesian inference with INLA" by Virgilio Gómez-Rubio
1.5 day INLA-course in Oslo, 5-6 November 2014
10th Applied Statistics 2013 International conference, Slovenia
3- day INLA course in St Andrews, June 2nd-4th
3-months position @Imperial College: ....spatial modelling in particular with Bayesian statistical models with R-INLA
A 2 day course on spatial statistics and modelling including INLA
A 5-day workshop on fitting geostatistical and spatial point process models to spatial survey data (St Andrews, Scotland)
A change in the Weibull-likelihood (from version 19.05.17)
A future change for survival models
Advanced mesh creation features and other topics
Alternative Linux builds
amlgm2016
An INLA-translation of the 2019 homework of Statistical Rethinking: (2nd edition)
An introduction to INLA and SPDE (Valencia 23-28th June 2016)
Another `gentle' blog-post...
Bayes 2013: An introduction to INLA with a comparison to JAGS (hands on)
Bayesian Biostatistics short course: WinBUGS/SAS/INLA, MUSC May 2012
Bayesian Computing with INLA & Spatial Modeling Using SPDEs, April 8-9th, Minneapolis
Bayesian Computing with INLA: A Review
Bayesian computing with INLA: IWSM2011
Bayesian computing with INLA: short course in Aalborg
Bayesian computing with INLA: short course in Athens
Bayesian computing with INLA: short course in Oslo
Bayesian computing with INLA: The 16th Norwegian Statistical Conference
Bayesian disease mapping course, University of Edinburgh, April 2012
Bayesian Disease Mapping courses: March 10-13, Charleston, South Carolina
Bayesian disease mapping with INLA (GEOVET 2013, London, 19th and 20th August)
Bayesian Disease Mapping with INLA and WinBUGS: June 23rd -27th 2014 University of Edinburgh, UK
Bayesian Statistics with R-INLA (Zurich, 12-13 May, 2016)
Baysian Disease Mapping with INLA: An Introduction (March, 2014)
Binaries are now built on Ubuntu-1804
BUC2: UNAM, Mexico City, 22nd-24th February 2016
Builds for MacOSX
Changes in the build and web-hosting of R-INLA
Code for the report "Improving Bayesian Local Spatial Models in Large Data Sets"
Comparing marginal likelihood estimates
Congratulations!!!
Course announcement: INLA and Spatial Statistics, Medical University of South Carolina
Course in London - UK
Course on Bayesian computing with INLA
Course on Bayesian inference for latent Gaussian models using INLA (Jan 24, Netherlands)
Course on GMRF and INLA
Course on INLA and SPDEs (Basel, Switzerland)
Course: Spatial modeling with INLA
EPSRC/RSS GRADUATE TRAINING PROGRAMME 2013 (22-26 July 2013)
Finally, R-4.0
Fitting geostatistical and spatial point process models to spatial survey data
Fractional Gaussian Noise models, are now available!
Free workshop: R-INLA for latent Gaussian models, Lund April 14-15
Funded PhD Studentship: "Modelling seismicity as a spatio-temporal point process using inlabru”
geoENV 2014 Paris
GEOMED2019
How besag/bym and those models should be defined...
INLA Course 21-22 November, 2012: Dalhousie University, Halifax, Canada
INLA course at ISEC 2014
INLA Course in Brazil
INLA course in Ilhéus, Brazil
INLA course in Lavras, Brasil
INLA course in Montpellier
INLA course in Oslo, 5-6 Nov
INLA Course, February 4, 2013: University of Girona, Girona, Spain
INLA courses in Brazil
INLA goes to Chile...
INLA short course in Belo Horizonte 18-19 August 2014
INLA shortcourse at KAUST: week 8 & 9
INLA Tutorial
INLA Tutorial: Fast Bayesian inference for Geostatistics and other latent Gaussian models
INLA users workshop
INLA webinar
INLA-course at IBS Channel Network Conference (April) 2015
INLA-course in Kenya 4/5th October
INLA-course: University of Minho, Guimarães, Portugal, October 3rd - 4th, 2013
INLA-lectures in Florence, 28-29 Jan, 2014.
INLA-SPDE course in Moncton - Canada
INLAcourse Iceland (October 2016)
Introduction to R-INLA for Bayesian Spatial Modeling, Rome 13-15Dec
ISI2011 Dublin, August
Joint survival-longitudinal models
Lectures on 'Disease risk modeling and visualization using R'
Lectures on ``Bayesian computing with INLA''
Lectures on SPDE/GMRF models and associated computational methods, Aalborg University, April 22-24 2014
LGM2012 - Workshop in Trondheim, Norway
macOS 10.15 Catalina
Mercurial -> git && bitbucket -> github
METIS library version 5
Mini-course in Bayesian Computing with INLA
A one-day course on the R-INLA-project in Helsinki
Minicourse on Spatial Models and Related Issues: 20th August 2013, Finland
Minicurso: Advances and Challenges in Space-time Modelling (17-18 June 2013, Lisbon)
Missing links
Missing links to be expected...
Model 'rgeneric' and R-4.0
Model criticism and conflict diagnostics using R-INLA
Multivariate spatial models for lattice data with INLA
N-Mixture models
National Center for Health Statistics & U.S Country teen birth rate
NCSE Summer Workshop 2015: "Flexible spatial (and spatio-temporal) modelling using the SPDE approach “
New book: "Bayesian Regression Modeling with INLA"
New comparison paper: logit mixed models
New features in R-INLA (April 2015)
New paper in applied fisheries ecolgy using INLA/SPDE
New paper in the 'Case Studies'-section
New paper on recent advances in INLA
New Shiny-app for creating and learning about meshes!
New tutorials on spatial models in INLA
New web address for shiny application SSTCDapp
Open PhD-grants
Open PhD-grants!
PhD and PostDoc job offerings: Knowledge based Non-Stationary Modeling
PhD in Tromsø?
PhD Scholarship!!!!
Point patterns help to predict landslides
Postdoc position at KAUST 2020-
Preview of new book: Advanced Spatial Modeling with Stochastic Partial Differential Equations Using R and INLA
Problems with openblas
R version 3.5
R-INLA code repository moved...
R-INLA lectures in Vienna 28th March 2014
R-INLA review (part II)
R-INLA Workshop on Thursday 6th Dec at QUT, Brisbane, Australia
Read paper at RSS 16th March 2011
RECENT ADVANCES IN SPATIAL STATISTICS IN ECOLOGY
Seventeenth International Conference on Artificial Intelligence and Statistics
Shiny application for the analysis of spatial and spatio-temporal count data: SSTCDapp
Short course "Spatial and Spatio-Temporal Bayesian Models with R-INLA"
Short course at Duke University April 4th
Short course on INLA, April 10th, Fort Collins
Short course on INLA, April 15th, Santa Cruz
SHORT COURSE – Bayesian computing and spatial modeling with the INLA-SPDE approach (28-29 Oct)
Short course: R-INLA in geoscience
SHORT COURSE: Spatial and Spatio-Temporal Bayesian Models with R-INLA 16-18 Nov
Short-course at the University of Girona, Spain April 24, 2014
Short-courses on spatial modeling using R-INLA
Some changes in the R-INLA package
Space-time INLA workshop
Spatial Modelling with INLA Workshop, 2-4/June, St.Andrews, Scotland
Spatial modelling with R-INLA workshop: 18-20 Sept @Uni-Sheffield
Spatial models in marine science using INLA and inlabru: Copenhagen 4-8th May
SPDE COURSE IN SPAIN
Stability issues for Ubuntu 18.04 and 20.04
Statsref article about INLA
STORE-i Masterclass; Univ of Lancaster, UK, 26-27 Feb
Testing-version 19.09.15
The 35th Finnish Summer School on Probability Theory and Statistics, June 3rd--7th, 2013
The Fifth Workshop on Bayesian Inference for Latent Gaussian Models with Applications: 14-16 Sept in Bath, UK
The INLA Book: out now!
The useR! conference, July 10-12 2013, Albacete, Spain
The WHO report on Ambient air pollution
Tutorial at Texas A&M: Jan 29th 2015
Two courses in Australia: week 35 & 36
Two day course in Johannesburg, South Africa, 17-18 Nov 2014
Two INLA courses in Brasil, October 2014
Two-day course in Pamplona, Spain, 1-2.12.2015
Two-day INLA course at Imperial College: 30/4 and 1/5-2015
Untitled Post
Untitled Post
Untitled Post
Upcoming INLA course in Zurich in October
Upcoming INLA-related tutorials at useR! and RaukR
Using INLA to fit complex spatial models to ecological data: Lisbon, 1st April 2015
Version_19.02.14
Want to do a PhD?
Want to do a PhD?
Workshop in Bayesian Inference for Latent Gaussian Models with Applications
Workshop in Glasgow
Workshop on Bayesian Inference for Latent Gaussian Models with Applications
Workshop on Spatial Point Process Models for Ecological Survey Data with INLA (20-23 March)
Workshop: BAYESIAN MODELING OF SPATIAL HEALTH DATA WITH INLA AND WINBUGS (June 4th)
XIV Applied Mathematics Meeting and XI Statistics Meeting, Cúcuta, Colombia
Related R-packages
R-package: AnimalINLA
R-package: excursions
tutorial
R-Package: INLABRU
R-package: ShrinkBayes
Scientific meetings
The R-INLA project
Small tutorials by Haakon Bakka
Haakon Bakka have prepared quite few small tutorials on various topics;
please go here
or
here
.
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