Publications
LIST OF PUBLICATIONS
1. Li J., Glover J.D., Zhang H., Peng M., Tan J., Mallick CB., Hou D., Yang, Y., Wu, S., Liu, Y. and Peng, Q., 2022. Limb development genes underlie variation in human fingerprint patterns. Cell, 185(1), pp.95-112. https://www.cell.com/cell/pdf/S0092-8674(21)01446-X.pdf
Epub on Jan 6, 2022.
2. Ranjan P, Devi C, Jain G, Mallick CB, Das P. Impact of B.1.617 and RBD SARS-CoV-2 variants on vaccine efficacy: an in silico approach. Indian Journal of Medical Microbiology Epub on April 1, 2022.
https://www.sciencedirect.com/science/article/pii/S0255085722000548
3. Singh PP, Suravajhala P, Basu Mallick C, Tamang R, Rai AK, Machha P, Singh R, Pathak A, Mishra VN, Srivastava P, Singh KK, Thangaraj K, Chaubey G. COVID-19: Impact on linguistic and genetic isolates of India. Genes and Immunity 23 (1), 47-50. (2022) Epub Oct 11 2021
https://doi.org/10.1038/s41435-021-00150-8
4. Singh PP, Tamang R, Shukla MK, Pathak A, Srivastava A, Gupta P, Bhatt A, Shrivastava AK, Upadhyay SK, Singh A, Maurya S, Saxena P, Singh V, Chaubey AK, Mishra DK, Patel Y, Pandey RK, Srivastava A, Khanam N, Das D, Bandopadhyay A, Chorol U, Pasupuleti N, Shrivastav SK, Prakash S, Sharma I, Sharma V, Mishra A, Dubey PK, Parihar A, Basu P, Sequeira JJ, Lavanya KC, Vijayalaxmi, Bhat KVS, Ijinu TP, Aggarwal DD, Prakash A, Yadav K, Yadav A, Upadhyay V, Mukim G, Bhandari A, Ghosh A, Kumar A, Yadav VK, Nigam K, Harshey A, Das T, Devadas D, Mishra SP, Ashish, Yadav AK, Singh NK, Kaur M, Kumar S, Srivastava N, Sharma C, Chowdhury R, Jain D, Kumar A, Shukla R, Mishra RK, Singh R, Tripathi YB, Mishra VN, Mustak MS, Rai N, Rawat SK, Suravajhala P, Singh KK, Basu Mallick C, Shrivastava P and Chaubey G. RE: Why there is a second wave in India? https://science.sciencemag.org/content/early/2020/12/07/science.abe9728/tab-e-letters?versioned=true Science e letter, Epub on Dec 8, 2020.
5. P. P. Singh, A. K. Srivastava, S. K. Upadhyay, A. Singh, S. Upadhyay, P. Kumar, V. Rai, P. Shrivastava, G. Chaubey, Serosurveillance Consortium BHU. The association of ABO blood group with the asymptomatic COVID-19 cases in India. Transfus. Apher. Sci., doi:10.1016/j.transci.2021.103224 (as part of Serosurvelliance Corsortium, BHU).
6. Riddell J, Mallick CB, Jacobs GS, Schoenebeck J, Headon DJ (2020). Characterisation of a second gain of function EDARvariant, encoding EDAR380R, in East Asia doi: https://doi.org/10.1038/s41431-020-0660-6 European Journal of Human Genetics Epub on Jun 4, 2020
7. Illiescu FM, Chaplin G, Rai N, Jacobs GS, Mallick CB, Mishra A, Thangaraj K, Jablonski NJ The influences of genes, the environment, and social factors on the evolution of skin color diversity in India. American Journal of Human Biology. Published online on 12th August 2018 (https://doi.org/10.1002/ajhb.23170)
8. Tamang R, Chaubey G, Nandan A, Govindaraj P, Singh VP, Rai N, Mallick CB, Sharma V, Sharma VK, Shah AM, Lalremruata A, Reddy AG, Rani DS, Doviah P, Negi N, Hadid Y, Pande V, Vishnupriya S, Driem GV, Behar DM, Sharma T, Singh L, Villems R, Thangaraj K (2018) Reconstructing the demographic history of the Himalayan and adjoining populations. Human Genetics 2018 137:129 (https://doi.org/10.1007/s00439-018-1867-2) Epub 2018 Jan 22.
9. Mishra A, Nizammuddin S, Mallick CB, Singh S, Prakash S, Siddiqui NA, Rai N, Carlus SJ, Sudhakar DVS, Tripathi VP, Möls M, Kim-Howard X, Dewangan H, Mishra A, Reddy AG, Roy B, Pandey K, Chaubey G, Das P, Nath SK, Singh L, Thangaraj K (2016) Genotype-phenotype study of Middle Gangetic Plain in India reveals association of rs2470102 with skin pigmentation. Journal of Investigative Dermatology, Vol 137, Issue 3, 670-677. (https://doi.org/10.1016/j.jid.2016.10.043)
10. Pagani L, Lawson DJ, Jagoda E, Mörseburg A, Eriksson A, Mitt M, Clemente F, Hudjashov G, DeGiorgio M, Saag L, Wall JD, Cardona A, Mägi R, Sayres MA, Kaewert S, Inchley C, Scheib CL, Järve M, Karmin M, Jacobs GS, Antao T, Iliescu FM, Kushniarevich A, Ayub Q, Tyler-Smith C, Xue Y, Yunusbayev B, Tambets K, Mallick CB, Saag L, Pocheshkhova E, Andriadze G, Muller C, Westaway MC, Lambert DM, Zoraqi G, Turdikulova S, Dalimova D, Sabitov Z, Sultana GN, Lachance J, Tishkoff S, Momynaliev K, Isakova J, Damba LD, Gubina M, Nymadawa P, Evseeva I, Atramentova L, Utevska O, Ricaut FX, Brucato N, Sudoyo H, Letellier T, Cox MP, Barashkov NA, Škaro V, Mulahasanovic L, Primorac D, Sahakyan H, Mormina M, Eichstaedt CA, Lichman DV, Abdullah S, Chaubey G, Wee JT, Mihailov E, Karunas A, Litvinov S, Khusainova R, Ekomasova N, Akhmetova V, Khidiyatova I, Marjanović D, Yepiskoposyan L, Behar DM, Balanovska E, Metspalu A, Derenko M, Malyarchuk B, Voevoda M, Fedorova SA, Osipova LP, Lahr MM, Gerbault P, Leavesley M, Migliano AB, Petraglia M, Balanovsky O, Khusnutdinova EK, Metspalu E, Thomas MG, Manica A, Nielsen R, Villems R, Willerslev E, Kivisild T, Metspalu M (2016) Genomic analyses inform on migration events during the peopling of Eurasia. Nature 538: 238-242 (https://www.nature.com/articles/nature19792)
11. Basu Mallick C, Iliescu FM, Möls M, Hill S, Tamang R, Chaubey G, Goto R, Ho SYW, Romero IG, Crivellaro F, Hudjashov G, Rai N, Metspalu M, Mascie-Taylor CGN, Pitchappan R, Singh L, Marta Mirazon-Lahr M, Thangaraj K, Villems R, Kivisild T. (2013) The Light Skin Allele of SLC24A5 in South Asians and Europeans Shares Identity by Descent. PLoS Genetics 9(11): e1003912. (https://doi.org/10.1371/journal.pgen.1003912) (As first and corresponding author)
12. Gallego Romero I, Basu Mallick C, Liebert A, Crivellaro F, Chaubey G, Thomas M, Villems R, Singh L, Swallow D, Thangaraj K, Mirazon-Lahr M, Kivisild T. (2012) Herders of Indian and European cattle share their predominant allele for milk tolerance. Molecular Biology and Evolution. Volume 29, Issue 1, 1 January 2012; 249–260. (https://doi.org/10.1093/molbev/msr190)
13. Metspalu M, Romero IG, Yunusbayev B, Chaubey G, Mallick CB, Hudjashov G, Nelis M, Mägi R, Metspalu E, Remm M, Pitchappan R, Singh L, Thangaraj K, Villems R, Kivisild T. (2011) Shared and unique components of human population structure and genome-wide signals of positive selection in South Asia. American Journal of Human Genetics 2011; 89(6):731–744. (https://doi.org/10.1016/j.ajhg.2011.11.010)
14. Ranjan SK, Mallick CB, Saha D., Vidyarthi AS and Ramani R. (2011) Genetic variation among species, races, forms and inbred lines of lac insects belonging to the genus Kerria (Homoptera, Tachardiidae). Genetics and Molecular Biology, Jul;34(3), 511-519 (https://dx.doi.org:10.1590/S1415-47572011000300023)
15. Saha D, Ranjan SK, Mallick CB, Vidyarthi AS, Ramani R. (2011) Genetic diversity in lac resin-secreting insects belonging to Kerri asp. as revealed through ISSR markers. Biochemical Systematics and Ecology; 2011; April 39(2):112–120 (https://doi.org/10.1016/j.bse.2011.01.016)
16. Chaubey G, Metspalu M, Choi Y, Mägi R, Romero IG, Soares P, van Oven M , Behar DM, Rootsi S, Hudjashov G, Mallick CB, Karmin M, Nelis M, Parik J, Reddy AG, Metspalu E, van Driem G, Xue Y, Tyler-Smith C, Thangaraj K, Singh L, Remm M, Richards MB, Lahr MM, Kayser M, Villems R, Kivisild T. (2010) Population Genetic Structure in Indian Austroasiatic speakers: The Role of Landscape Barriers and Sex-specific Admixture. Molecular Biology and Evolution.2011 Feb; 28(2):1013–24. (https://doi.org/10.1093/molbev/msq288)
17. Chaubey G, Karmin M, Metspalu E, Metspalu M, Selvi-Rani D, Singh VK, Parik J, Solnik A, Naidu BP, Kumar A, Adarsh N, Mallick CB, Trivedi B, Prakash S, Reddy R, Shukla P, Bhagat S, Verma S, Vasnik S, Khan I, Barwa A, Sahoo D, Sharma A, Rashid M, Chandra V, Reddy AG, Torroni A, Foley RA, Thangaraj K, Singh L, Kivisild T, Villems R. (2008) Phylogeography of mtDNA haplogroup R7 in the Indian peninsula. BMC Evolutionary Biology. 2008; 8:227. (https://doi.org/10.1186/1471-2148-8-227)
18. Thangaraj K, Chaubey G, Kivisild T, Selvi Rani D, Singh VK, Ismail T, Carvalho-Silva D, Metspalu M, Bhaskar LVKS, Reddy AG, Chandra S, Pande V, Prathap Naidu B, Adarsh N, Verma A, Jyothi IA, Mallick CB, Shrivastava N, Devasena R, Kumari B, Singh AK, Dwivedi SKD, Singh S, Rao G, Gupta P, Sonvane V, Kumari K, Basha A, Bhargavi KR, Lalremruata A, Gupta AK, Kaur G, Reddy KK, Rao AP, Villems R, Tyler-Smith C, Singh L. (2008) Maternal footprints of Southeast Asians in North India. Human Heredity. 2008; 66 (1):1–9. (https://doi.org/10.1159/000114160)
19. Thangaraj K, Sridhar V, Kivisild T, Reddy AG, Chaubey G, Singh VK, Kaur S, Agarawal P, Rai A, Gupta J, Mallick CB, Kumar N, Velavan TP, Suganthan R, Udaykumar D, Kumar R, Mishra R, Khan A, Annapurna C, Singh L. (2005) Different population histories of the Mundari- and Mon-Khmer-speaking Austro-Asiatic tribes inferred from the mtDNA 9-bp deletion/ insertion polymorphism in Indian populations. Human Genetics. May 2005; 116 (6): 507–517. (https://doi.org/10.1007/s00439-005-1271-6)