BWA
What is BWA?
What is BWA?
BWA, or Burrows-Wheeler Aligner, "is a software package for mapping low-divergent sequences against a large reference genome, such as the human genome" (BWA homepage).
How is BWA loaded?
How is BWA loaded?
The below can be used to view all of the installations of BWA on a particular system, where this example uses Coeus.
$ module avail |& grep -i "bwa"
Biosciences/bwa/0.7.12/gcc-7.2.0
How is BWA invoked?
How is BWA invoked?
To invoke BWA's primary binary, use the below. For more on using BWA, refer to here.
$ module load Biosciences/bwa/0.7.12/gcc-7.2.0
$ bwa