Share & Publish

Why share & publish data?

Making your finalised data (or snapshots of your data) available to others has a number of benefits, including:

Source: Ghent University, University of Pittsburgh, University of Oxford  & UK Data Service

Plan to share data & publish data

Plan ahead to create high-quality, shareable research data

In research projects, early planning is essential to ensure that activities are considered in detail and are organised, to ensure efficiency and successful completion of the work.

The same applies to the planning of how research data will be managed over the length of a research project and beyond. In this digital age, most research projects are data centric and therefore research needs to be planned around the data. A data management plan is therefore the ideal planning tool for researchers. Source: UK Data Service

Degrees of data sharing

Questions to consider:


Sharing research data is not an all-or-nothing choice, but a spectrum. It ranges from making data fully open on one end, to keeping them fully closed on the other, with various possible forms of restricted/controlled access in-between. Ghent University

Open Research data

Data that can be 'freely used, modified and shared by anyone for any purpose' (opendefinition.org).Ghent University

Closed data

Data that are temporarily under embargo, or that cannot be shared at all. Ghent University

Restricted data

Data that are not shared in a fully open way, but made available under more restricted access and use conditions. This means that there are limits on who can access and use the data, how, and/or for what purpose.

Data repositories can offer the possibility to deposit your data under restricted/controlled access. Ghent University

Restrictions on data sharing

Research data cannot always be shared (immediately) in a fully open way. Sometimes they can only be made available under more restricted conditions and/or after an embargo period, or – in some circumstances – not even at all.

Possible reasons for restricting the sharing of data are:

Ghent University


'As open as possible, as closed as necessary'

Which level of sharing you should choose largely depends on what is appropriate given the nature of your data, and on how well you planned for data sharing (e.g. so that you have the right permissions/consent in place, when applicable). Ghent University

Ways of sharing data

Consideration needs to be given to

In principle, there are various ways of sharing data beyond your project or research team, each with their pros and cons: 

The latter option, i.e. sharing data via a data repository, is preferred, as it offers many benefits for researchers, the scientific community and society at large. It is the best option for ensuring that data are accessible in a sustainable manner.

Keeping data findable, understandable and effectively reusable requires some preparation and effort on your part (i.e. keeping files organized, documentation and metadata, and having the access rights and reuse permissions in place).

Ghent University. University of Pittsburgh

FAIR data principles

What is FAIR and why is it important?

The FAIR Data Principles were developed to guide researchers in the process of making data findable (data can be discovered by others), accessible (data can be made available to others), interoperable (data can be integrated with other data) and reusable (data can be reused by others).

The goal of applying the FAIR Data Principles is to enable and enhance the reuse of data (and other digital objects), by both humans and machines.

Funders, publishers and policy makers also encourage the generation of FAIR data

Under the fair dealing concept, data can be copied for non-commercial teaching or research purposes, private study, criticism or review without infringing copyright, provided that the owner of the work is sufficiently acknowledged. UK Data Service

Findable

The first step in (re)using data is to find them. Metadata and data should be easy to find for both humans and computers. Machine-readable metadata are essential for automatic discovery of datasets and services, so this is an essential component of the FAIRification process.

F1. (Meta)data are assigned a globally unique and persistent identifier

F2. Data are described with rich metadata (defined by R1 below)

F3. Metadata clearly and explicitly include the identifier of the data they describe

F4. (Meta)data are registered or indexed in a searchable resource

GoFair

Accessible

Once the user finds the required data, she/he/they need to know how they can be accessed, possibly including authentication and authorisation.

A1. (Meta)data are retrievable by their identifier using a standardised communications protocol

A1.1 The protocol is open, free, and universally implementable

A1.2 The protocol allows for an authentication and authorisation procedure, where necessary

A2. Metadata are accessible, even when the data are no longer available

GoFair

Interoperable

The data usually need to be integrated with other data. In addition, the data need to interoperate with applications or workflows for analysis, storage, and processing.

I1. (Meta)data use a formal, accessible, shared, and broadly applicable language for knowledge representation.

I2. (Meta)data use vocabularies that follow FAIR principles

I3. (Meta)data include qualified references to other (meta)data

GoFair

Reusable

The ultimate goal of FAIR is to optimise the reuse of data. To achieve this, metadata and data should be well-described so that they can be replicated and/or combined in different settings.

R1. (Meta)data are richly described with a plurality of accurate and relevant attributes

R1.1. (Meta)data are released with a clear and accessible data usage license

R1.2. (Meta)data are associated with detailed provenance

R1.3. (Meta)data meet domain-relevant community standards

GoFair

FAIR-Aware helps you assess your knowledge of the FAIR Principles, and better understand how making your data(set) FAIR can increase the potential value and impact of your data.

The tool is discipline-agnostic, making it relevant to any scientific field. You can use this tool at any point during your research before depositing your data(set) in a data repository. It is also good to keep in mind that many FAIR-related decisions can already be made in the research planning phase, so you may want to use FAIR-Aware early on to help you make those decisions. Also, if you are a trainer, you can use FAIR-Aware to assess the knowledge of FAIR of your course participants.

FAIR concepts

Machine-readability or actionability

Machine-readability or actionability enables machines (e.g. scripts, software, algorithms) to read, understand and process the data and aggregate data from different sources, types and disciplines. As such, it can allow research at a much larger scope, scale and speed, often needed in contemporary science.

For instance, if the (meta)data are machine-readable, machines will be able to locate a digital object, identify the type of digital object (is it a dataset or a publication? does it contain experimental data or simulation data?) and determine whether it is usable with respect to accessibility, license, data format or other use constraints. Ghent University

Persistent identifiers (PIDs) and globally unique identifiers (guid, uuid)

A PID, such as a DOI, PURL, or Handle, is a long lasting reference to a digital object. PIDs avoid broken links and difficulties to locate a dataset that is e.g. underlying a journal article. A PID uniquely identifies the digital object and ensures that it can always be located, even if its web address (URL) changes. A PID can be used for data citation (e.g. ORCID). Ghent University

Digital Object Identifier (DOI)

The Digital Object Identifier or DOI is a commonly used identifier for research datasets.  It is generated by the central registries e.g. DataCite & CrossRef. A DOI always comprises:

An example for a dataset held at the Dryad repository is: https://doi.org/10.5061/dryad.4h16331. Ghent University

By clicking on a DOI link, you will be taken to the current URLs related to a single resource. 

Metadata

Metadata are data about data. Data must be formatted, described and cleaned to ensure that other researchers will find the datasets useful and understandable.

Metadata are a structured and machine-readable form of documentation and are key to making data FAIR. 

Metadata are managed by data repositories to enable you to search and filter the data. Moreover, online search engines can harvest (i.e. automatically collect) and index (i.e. restructure to speed up searches) metadata to enable searches across data repositories e.g. through Google or through data portals.

Controlled vocabulary, taxonomy, ontology

There are many different ways in which you can describe your data. Terminology might be ambiguous (e.g. the word “root” has a different meaning in biology and maths). Moreover, terminology might be highly domain-specific and therefore difficult to understand.

A controlled vocabulary can help to restrict the terminology that you are using to describe your data to previously defined terms. In taxonomies and ontologies, relations and/or semantics are added to the terms to increase the structure and expressiveness of the controlled vocabulary. For instance, geoNames can be used for geospatial semantic information, where the country name “France will be connected to info such as the continent it is part of, ISO abbreviation for the country, used languages, etc.).

Using controlled vocabularies will improve the discovery (e.g. because different spelling is avoided), linking, understanding and reuse (e.g. because data can be aggregated more easily) of the data. Ghent University

Authentication and authorization

Authentication: the identity of the user will be verified. 

Authorization: it will be verified whether the user has access to specific data, applications or files.  Ghent University

Licensing data

Many kinds of data created as part of a research project are subject to the same rights as literary or artistic work. Such items acquire rights like copyright or more general Intellectual Property rights when they are created. This gives the rights owner control over the exploitation of their work, such as the right to copy and adapt the work, the right to rent or lend it, the right to communicate it to the public and the right to license and distribute. These rights need to be taken into account when creating, using and sharing data. UK Data Service

What is copyright, who owns it and how long does it last? Copyright is an intellectual property right assigned automatically to the creator. It prevents unauthorised copying and publishing of an original work. Copyright applies to research data and plays a role when creating, sharing and reusing data. UK Data Service


Most research outputs, such as spreadsheets, publications, reports and computer programs, fall under literary work and are therefore protected by copyright. Facts, however, cannot be copyrighted. UK Data Service

When making research data publicly available, it is important to let potential users know in advance what they are allowed to do with those data. Licensing is an effective way to communicate such permissions.

A trusted data repository will normally apply a license to any dataset it holds, which you typically select (from a list of options) when depositing data. Ghent University

Open research data

Good practice is to apply a standard and open license for open research data, as it ensures legal interoperability and the widest possible reuse.

Among the standard licenses commonly used for research data is the suite of Creative Commons (CC) licenses, which offer different levels of permission. Ghent University

Restricted data

For data requiring access restrictions, a standard license is usually not appropriate. In such cases a bespoke license will be needed instead (e.g. an ‘end user license’ or ‘user agreement’ as implemented by a trusted data repository) to make the data available. Ghent University

Citing data

Citing a dataset correctly is just as important as citing articles, books, images and websites – each dataset is a source of evidence to support your argument. UK Data Service

Research data can be cited in the same way as publications. 

A data citation should contain the following minimum elements:

Ghent University

This unit outlines the benefits and challenges associated with sharing research data openly.

After completing this unit you will:


▪ Be informed about the benefits and barriers to sharing research data.

▪ Understand the principles of open research data.

▪ Know about the FAIR principles and how to share your research data in a way that is FAIR.

▪ Recognize why you might choose to license your dataset, and the different types of open data licence that are available.

▪ Be aware of the role of data access statements when publishing the results of your research.