ID

GRAM-POSITIVE BACTERIA

1. Staphylococcus aureus (MSSA/MRSA)

2. Streptococcus pyogenes (Group A)

3. Streptococcus pneumoniae

4. Enterococcus faecalis/faecium

5. Group B Streptococcus (S. agalactiae)

6. Clostridium difficile

7. Clostridium perfringens

8. Clostridium botulinum

9. Clostridium tetani

10. Bacillus anthracis

11. Listeria monocytogenes

12. Corynebacterium diphtheriae

13. Actinomyces israelii

GRAM-NEGATIVE BACTERIA

14. Neisseria meningitidis

15. Neisseria gonorrhoeae

16. Escherichia coli

17. Klebsiella pneumoniae

18. Pseudomonas aeruginosa

19. Salmonella spp.

20. Shigella spp.

21. Haemophilus influenzae type B

22. Campylobacter jejuni

23. Legionella pneumophila

24. Bartonella henselae

ACID-FAST/ATYPICAL BACTERIA

25. Mycobacterium tuberculosis

26. Mycobacterium leprae

27. Nocardia asteroides

28. Chlamydia trachomatis

29. Chlamydia pneumoniae

30. Mycoplasma pneumoniae

31. Rickettsia rickettsii

32. Coxiella burnetii

33. Ehrlichia/Anaplasma

SPIROCHETES

34. Treponema pallidum (Syphilis)

35. Borrelia burgdorferi (Lyme)

36. Borrelia recurrentis

37. Leptospira interrogans

TOXIN-MEDIATED SYNDROMES

38. Toxic shock syndrome (S. aureus/Strep pyogenes)

39. Scalded skin syndrome (S. aureus)

TICK-BORNE DISEASES

40. Lyme disease (Borrelia burgdorferi)

41. Rocky Mountain spotted fever (R. rickettsii)

42. Ehrlichiosis/Anaplasmosis

ZONOTIC INFECTIONS

43. Brucella spp.

44. Yersinia pestis (Plague)

45. Francisella tularensis (Tularemia)

46. Pasteurella multocida

FUNGAL INFECTIONS

47. Candida albicans

48. Aspergillus fumigatus

49. Cryptococcus neoformans

50. Histoplasma capsulatum

51. Coccidioides immitis/posadasii

52. Blastomyces dermatitidis

53. Pneumocystis jirovecii

54. Sporothrix schenckii

PARASITIC INFECTIONS

55. Plasmodium falciparum (Malaria)

56. Toxoplasma gondii

57. Trypanosoma cruzi (Chagas)

58. Leishmania donovani

59. Giardia lamblia

60. Entamoeba histolytica

61. Cryptosporidium parvum

62. Trichomonas vaginalis

63. Ascaris lumbricoides

64. Enterobius vermicularis (Pinworm)

65. Strongyloides stercoralis

66. Necator americanus (Hookworm)

67. Taenia solium (Cysticercosis)

68. Echinococcus granulosus

69. Schistosoma spp.

VIRAL INFECTIONS

70. HIV

71. Influenza virus

72. RSV

73. Parainfluenza virus

74. Rhinovirus

75. Adenovirus

76. CMV

77. EBV

78. HSV-1/2

79. VZV

80. HHV-8 (Kaposi sarcoma)

81. Measles virus

82. Mumps virus

83. Rubella virus

84. Parvovirus B19

85. HPV

86. HBV

87. HCV

88. HDV

89. HAV

90. HEV

91. Rabies virus

92. Dengue virus

93. Zika virus

94. West Nile virus

PRION DISEASE

95. Creutzfeldt-Jakob disease

ATYPICAL/OTHER HIGH-YIELD

96. Whipple's disease (Tropheryma whipplei)

97. Tropical pulmonary eosinophilia (Filariasis)

98. Visceral leishmaniasis (Kala-azar)

99. Granuloma inguinale (Klebsiella granulomatis)