Useful Links

Bioinformatics sites 

Gene Expression 

BioGPS: http://biogps.org/#goto=welcome 

Expression Altas: https://www.ebi.ac.uk/gxa/home 

Metascape: https://metascape.org/gp/index.html#/main/step1 

Open Reading Frame: https://www.ncbi.nlm.nih.gov/orffinder/ 

Alignment: https://www.ebi.ac.uk/jdispatcher/ 

The Genotype-Tissue Expression (GTEx): https://gtexportal.org/home/ 

Systems biology

MetaboAnalyst: https://www.metaboanalyst.ca/MetaboAnalyst/ModuleView.xhtml 

Autophagy 

iLIR Autophagy database: https://ilir.warwick.ac.uk/ 

HADb Autophagy-dedicated Database: http://autophagy.lu/ 

Protein-Protein interaction

Bioplex interactome: https://bioplex.hms.harvard.edu/ 

GeneMANIA : https://genemania.org/ 

Gene responses to exercise or aging or dieases 

SarcoAtlas: https://sarcoatlas.scicore.unibas.ch/ 

Myoatlas: https://research.cchmc.org/myoatlas/ 

MetaMEx: https://www.metamex.eu/app/metamex 

MoTrPAC Data Hub: https://motrpac-data.org/ 

Human skeletal muscle aging atlas: https://www.muscleageingcellatlas.org/ 

Transcriptome atlas of leg muscles from healthy human: https://tabbassidaloii.shinyapps.io/muscleAtlasShinyApp/ 

The Myotonic Dystrophy Deep Sequencing Data: http://dmseq.org/

Neuro-Muscle Database (NeuroMuscleDB): http://yu-mbl-muscledb.com/NeuroMuscleDB/index.php   

Systems genetics resource for the associations between SNP, gene, pathway (module) and phenotype: https://systems-genetics.org/ 

Information on various neuromuscular disorders 

The Neuromuscular Disease Center at Washington University : https://neuromuscular.wustl.edu/index.html 

TREAT-NMD Standard Operating Procedure  : https://www.treat-nmd.org/resources-and-support/sop-library/ 

Muscle fixation video: https://www.youtube.com/watch?v=7rgFJB_EiLw 

Scientific writting 

https://www.phrasebank.manchester.ac.uk/ 

Molarity Calculator 

https://www.graphpad.com/quickcalcs/molarityform/ 

Sample Size Calculations

https://www.biomath.info/power/ttest.htm 

Research groups / networks                                     

Canadian Neuromuscular Disease Network (NMD4C): https://neuromuscularnetwork.ca/ 

RQRV – Réseau Québecois de recherche sur le vieillissement : https://rqrv.com/ 

Le groupe de recherche en signalisation cellulaire (GRSC)