00. LINUX INSTALLATION

This procedure is only useful for Debian based distributions: Ubuntu, Kubuntu, Xubuntu, Lubuntu and Linux Mint.

If you are in ULL go to https://acceso.ull.es/ in order to activate the ports.

1. ENABLE PUBLIC KEYS OF PPA YOU WILL INCLUDE IN STEP 2. Open a Terminal with Ctrl Alt T and paste:

   1. sudo apt-key adv --keyserver keyserver.ubuntu.com --recv-keys E084DAB9

   2. FIND OUT WHAT VERSION OF UBUNTU OR DERIVATIVES YOU HAVE THROUGH: cat /etc/*release

   3. Download in Donwloads folder Install_ULLR_Ubuntu_bionic.sh (Ubuntu 18.04) or Install_ULLR_Ubuntu_focal.sh (Ubuntu 20.04)

   4. VERY IMPORTANT. BEFORE R INSTALL, in a terminal: sudo apt-get update && sudo apt-get upgrade

      1. Open a Termianl (Control Alt T) and copy and paste the following 3 lines of code. This procedure could last two hours. When install procedure is complete, you will see the message: "PLEASE RE-START RSTUDIO".

         1. cd ~/Downloads

         2. sudo chmod a+x Install_ULL*

            1. sudo sh Install_ULLR_Ubuntu_focal.sh

      2. DOWNLOAD AND INSTALL RStudio 32 o 64 bits This PDF will help you to optimally configure Rstudio. It is critical for the operation of the toolbox to follow the PDF configuration instructions verbatim.

2. Finally, we must "turn off" the automatic R updater, in order, to prevent unwanted updates that may result in incompatibility with libraries running. In a syntax window Copy and Paste this commands:

• sudo apt-mark hold r-base

• sudo apt-mark hold r-base-dev

• sudo apt-mark hold r-base-core

Next, you will learn the minimum guidelines to use this instrument in an autonomous way: First Steps

HOW TO UPGRADE ULLRTOOLBOX (UBUNTU AND DERIVATIVES)

ULLRtoolbox is frequently updated. Whenever there is a new version of the toolbox, you will get a message in console with the needed instructions to carry out it. In general, these indications will be in general as follows:

• 1. Download Update_ULLRToolbox.sh in Downloads folder

1. Open a Terminal with Control Alt T

2. cd ~/Downloads

3. sudo chmod a+x Update_ULLRToolbox.sh

4. sudo sh ./Update_ULLRToolbox.sh

HOW TO INSTALL JAGS IN ORDER TO CARRY OUT BAYESIAN CONTRASTS

In order to be able to make bayesian contrasts, many librarys must be installed. Download the file Install_Bayes.sh (in Downloads folder) and run the following command in a terminal (Control Alt T):

sudo sh ~/Downloads/Install_Bayes.sh

sudo R

library.install.fnc('BANOVA')

library.install.fnc('BEST')

q( )