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My name is Soumya Banerjee and I am a post-doctoral research fellow with experience working in USA and Germany.

My research interest is in computational immunology. I use techniques from computer science to solve problems in immunology and take inspiration from the immune system to solve problems in computer science.

a) Using techniques from computer science to solve problems in immunology.

I use machine learning techniques to solve problems in biology, especially immunology. I employ ordinary differential equation (ODE) models and spatially explicit agent based models (ABMs) to understand kinetics of West Nile Virus (WNV). I use Hierarchical Bayesian non-linear mixed effects models to simulate immune response in different species.

b) Taking inspiration from the immune system to solve problems in computer science.

My work suggests how chemical signals and the physical architecture of the immune system may lead to nearly scale-invariant immune search and response. I look at how we can take inspiration from this and create human-engineered distributed systems with faster search and response characteristics.


SummarySoumya Banerjee has a PhD in Computer Science from the University of New Mexico, USA. He worked in Los Alamos National Laboratories while he was in graduate school. Prior to graduate school, he was a software engineer working in the financial services sector for Fortune 500 clients.

His work is at the intersection of computer science and biological systems – he uses tools from computer science to study biological systems and takes inspiration from biological systems to design more efficient human-engineered systems.  He is skilled in machine learning techniques and mathematical modelling using spatially explicit agent-based models and computationally tractable differential equation models.

He works closely with people from other domains, especially experimentalists. His work has been recognized with a University of New Mexico Student Award for Innovation in Informatics in 2010.

He takes pride in writing industrial-strength software, which he attributes to years working in industry and skills honed in academia. As of December 2012, he was ranked within the top 500 worldwide on MATLAB Central (an online repository for Matlab code contributed by users all over the world).



  
I can be reached at - FIRST NAME AT CS DOT UNM DOT EDU
All in small letters

ATTN - Soumya Banerjee
University of New Mexico
Mail Stop - MSC01 1130
Farris Engineering Center, Room 107
Albuquerque, NM 87131-0001
USA

Phone: (505) 277-3122
Fax: (505) 277-6927


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