Bacterial production and activity

Šimek, K., Horňák, K., Jezbera, J., Nedoma, J., Znachor, P., Hejzlar, J., Seďa, J. Spatio-temporal patterns of bacterioplankton production and community composition related to phytoplankton composition and protistan bacterivory in a dam reservoir. Aquatic Microbial Ecology, 51: 249–262, 2008 (IF= 2.385).

Mašín, M., Nedoma, J., Pechar, J., Koblížek, M. Distribution of aerobic anoxygenic phototrophs in temperate freshwater systems. Environmental Microbiology 10: 1988–1996, 2008 (IF= 4.929).

Weinbauer, M.G., Horňák, K., Jezbera, J., Nedoma, J. , Dolan, J.R., Šimek, K. Synergistic and antagonistic effects of viral lysis and protistan grazing on bacterial biomass, production and diversity. Environmental Microbiology, 9: 777–788, 2007 (IF= 4.929).

Šimek, K., Weinbauer, M.G., Horňák, K., Jezbera, J., Nedoma, J., Dolan, J.R. Grazer and virus-induced mortality of bacterioplankton accelerates development of Flectobacillus populations in a freshwater community. Environmental Microbiology, 9: 789–800, 2007 (IF= 4.929).

Straškrábová, V., Cogalniceanu, D., Nedoma, J., Parpală, L., Postolache, C., Tudorancea, C., Vădineanu, A., Vălcu, C.-M., Zinevici, V. Bacteria and pelagic food webs in Pristine alpine lakes (Retezat mountains, Romania). Transylvanian Review of Systematic and Ecological Research, 3: 1–10, 2006 (no IF).

Horňák, K., Jezbera, J., Nedoma, J., Gasol, J.M., Šimek, K. Effects of resource availability and bacterivory on leucine incorporation in different groups of freshwater bacterioplankton, assessed using microautoradiography. Aquatic Microbial Ecology, 45: 277–289, 2006 (IF= 2.209).

Šimek, K., Horňák, K., Jezbera, J., Nedoma, J., Vrba, J., Straškrábová, V., Macek, M., Dolan, J.R., Hahn, M.W. Maximum growth rates and possible life strategies of different bacterioplankton groups in relation to phosphorus availability in a freshwater reservoir. Environmental Microbiology, 8: 1613-1624, 2006 (IF= 4.630).

Nedoma, J., Vrba, J. Specific activity of cell-surface acid phosphatase in different bacterioplankton morphotypes in an acidified mountain lake. Environmental Microbiology, 8: 1271–1279, 2006 (IF= 4.630).

Horňák, K., Mašín, M., Jezbera, J., Bettarel, Y., Nedoma, J., Sime-Ngando, T., and Šimek, K. Effects of decreased resource availability, protozoan grazing and viral impact on a structure of bacterioplankton assemblage in a canyon-shaped reservoir. FEMS Microbiology Ecology, 52: 315-327, 2005 (IF= 2.787).

Šimek, K., Horňák, K., Jezbera, J., Mašín, M., Nedoma, J., Gasol, J.M., Schauer, M. Influence of top-down and bottom-up manipulations on the R-BT065 subcluster of beta-proteobacteria, an abundant group in bacterioplankton of a freshwater reservoir. Applied and Environmental Microbiology, 71: 2381-2390, 2005 (IF= 3.818).

Straškrábová, V., Izmest’eva, L.R., Maksimova, E.A., Fietz, S., Nedoma, J., Borovec, J., Kobanova, G.I., Shchetinina, E.V., Pislegina, E.V. Primary production and microbial activity in the euphotic zone of Lake Baikal (Southern Basin) during late winter. Global and Planetary Change, Special issue (Eds: Oberhänsli, H and Mackay, A.W.) 46 (1-4): 57-73, 2005 (IF= 2.223).

Jezbera, J., Nedoma, J., Šimek, K. Longitudinal changes in protistan bacterivory and bacterial production in two canyon-shaped reservoirs of different trophic status. Hydrobiologia, 504 (Special Issue): 115-130, 2003 (IF= 0.720).

Mašín, M., Jezbera, J., Nedoma J., Straškrabová, V., Hejzlar J., Šimek, K. Changes in bacterial community composition and microbial activities along the longitudinal axis of two canyon-shaped reservoirs with different inflow loading. Hydrobiologia, 504 (Special Issue): 99-113, 2003 (IF= 0.720).

Nedoma, J., Straškrábová, V., Znachor, P., Vrba, J. Primary and bacterial production in three acidified lakes in the Bohemian Forest. Silva Gabreta, 9: 53-70, 2003 (no IF).

Šimek, K., Horňák, K., Mašín, M., Christaki, U., Nedoma, J., Weinbauer, M.G., Dolan, J.R. Comparing the effects of resource enrichment and grazing on a bacterioplankton community of a meso-eutrophic reservoir. Aquatic Microbial Ecology, 31: 123-135, 2003 (IF= 2.116).

Weinbauer, M.G., Christaki, U., Nedoma, J., Šimek, K. Comparing the effects of resource enrichment and grazing on viral production in a meso-eutrophic reservoir. Aquatic Microbial Ecology, 31: 137-144, 2003 (IF= 2.116).

Šimek, K., Nedoma, J., Pernthaler, J., Posch, T., Dolan, J. R. Altering the balance between bacterial production and protistan bacterivory triggers shifts in freshwater bacterial community composition. Antonie van Leeuwenhoek, 81: 453-463, 2002 (IF= 0.988).

Šimek, K., Armengol, J., Comerma, M., Garcia, J.C., Kojecká, P., Nedoma, J., Hejzlar, J. Changes in the epilimnetic bacterial community composition, production, and protist-induced mortality along the longitudinal axis of a highly eutrophic reservoir. Microbial Ecology, 42: 359-371, 2001 (IF= 2.891).

Šimek, K., Pernthaler, J., Weinbauer, M.G., Horňák, K., Dolan, J.R., Nedoma, J., Mašín, M., Amann, R. Changes in bacterial community composition and dynamics and viral mortality rates associated with enhanced flagellate grazing in a mesoeutrophic reservoir. Applied and Environmental Microbiology, 6: 2723-2733, 2001 (IF= 3.688).

Straškrabová, V., Callieri, C., Carrillo, P., Cruz-Pizarro, L., Fott, J., Hartman, P., Macek, M., Medina-Sánchez, J. M., Nedoma, J., Šimek, K. Investigations on pelagic food webs in mountain lakes – aims and methods. Journal of Limnology, 58: 77-87, 1999 (no IF).

Šimek, K., Kojecká, P., Nedoma, J., Hartman, P., Vrba, J., Dolan, J. R. Shifts in bacterial community composition associated with different microzooplankton size fractions in a eutrophic reservoir. Limnology and Oceanography, 44: 1634-1644, 1999 (IF= 3.018).

Šimek, K., Hartman, P., Nedoma, J., Pernthaler, J., Springmann, D., Vrba, J., Psenner, R. Community structure, picoplankton grazing and zooplankton control of heterotrophic nanoflagellates in a eutrophic reservoir during the summer phytoplankton maximum. Aquatic Microbial Ecology, 12: 49-63, 1997 (IF= 1.474).

Nedoma, J., Vrba, J., Hejzlar, J., Šimek, K., Straškrabová, V. N-acetylglucosamine dynamics in freshwater environments: Concentration of amino sugars, extracellular enzyme activities, and microbial uptake. Limnology and Oceanography, 39: 1088-1100, 1994 (IF= 2.151).