Diego Forero, MD, PhD
Personal Website
Genotyping Portal
A comprehensive (and freely available) online resource about methods for DNA genotyping, screening and sequencing (more than 220 techniques)
54 methods. SNP chips, Sequenom, TaqMan, HRM, M-HRM, RCR-RFLP, PCR-ASO, PCR-OLA, PCR-PIRA, ARMS-PCR, F-M-ARMS, ARMS-qPCR, T-ARMS, M-T-ARMS, M-T-ARMS-CE, Bi-PASA, PCR-DASH, Pyrosequencing, Molecular Beacons, FP-TDI, Invader, xMAP, SNaPshot, SNPlex, GOOD Assay, SNPWave, ALM-ASA, PCR-CTPP, Melt-MAMA, Mc-SNP, TP-PCR, SNP-SCALE, M-SNP-SCALE, TSP, Bi-ASA, ASB-PCR, D-PCR-A, KASPar, MARA, PCR/LDR, ASQ, Genotyping issues, Comparison of methods.
32 methods. CNV arrays, MLPA, Southern blot, qPCR-SYBR, qPCR-TaqMan, MAQ, MAPH, QuadMAPH, QMPSF, QF-PCR, CGP, UPQFM, RD-PCR, MLGA, QF-PCR, CFMSA, ARCS, FDA, D-qPCR, PCR-AGE, HRM, UFPCR, MLGA, MALDI, Sequencing, DHPLC, DASH, Comparison of methods.
39 methods. PCR, M-PCR, cPCR, N-PCR, TD-PCR, TU-PCR, SD-PCR, S-PCR, IS-PCR, HS-PCR, COLD-PCR, I-COLD-PCR, RAPD, AP-PCR, dPCR, LAMP, M-LAMP, NASBA, HDA, ICAN, RCA, RPA, SDA, SMAP 2, SPIA, LDR, HDA-TaqMan, TAIL-PCR, MegaPlex PCR, PCR additives, Fluorescent labeling, Colorimetric Detection, qPCR normalization, Software for PCR analysis, Comparison of Thermal Cyclers, PCR contamination, qPCR standards.
20 methods. Salting Out, Buccal cells, FFPE samples, PEP-WGA, MDA-GWA, GWA-Exome, GWA-Reliability, Pooled blood, Pooled DNA, FTA cards, Blood storage, Nanodrop, PicoGreen, qPCR quantification, Sample-to-result platform, Comparison of methods.
Companies manufacturing reagents and equipment for molecular genetics.
15 methods. HRM, PCR-SSCP, C-SSCP, dHPLC, HRMA, PCR-CSGE, C-CSGE, M-C-CSGE, PCR-DGGE, TDGS, F-DOVAM-S, EMD, PTT, Comparison of methods, Prioritization of regions.
18 methods. Sanger, Nanopore, 454, Illumina, Helicos, SOLiD, Complete Genomics, Ion Torrent, AluScan, Hi-Plex, TLA, Sequence Capture, Exome Sequencing, Difficult templates, Sequencing facilities, Primer design.
61 methods. BSP, MSP, MS-HRM, dMS-HRM, MethyLight, M-MethyLight, Q-MSP, QM-MSP, fast-COLD-MS-PCR, COBRA, N-MSP, RSMA, ASMM-RTQ-PCR, MMQPCR, ConLight-MSP, qMS-HRM, LoMA-B, QuantiGene-Luminex, QAMA, MS-LAMP, DREAMing, NBSP, HELP, MMS-HDCR, mRRBS, ESPCR, ALT-qPCR, OBBPA-ddPCR, QASM, COBRA-Seq, MethylationEPIC, Mitochondrial DNA, Comparison of methods.
113 articles. DNA genotyping, DNA Sequencing, CNV Methods, TaqMan, PCR, qPCR, M-PCR, Luminex, GWA, DNA Polymerases, DNA Banking, HRM, DNA pooling, DNA Methylation, Telomere length, Isothermal Amplification, Primer Design, PCR Inhibitors, Thermal Cyclers, Mutation Nomenclature, PCR Labs.
47 articles. M-PCR, SSCP, C-SSCP, C-CSGE, HRMA, BSP, MS-HRM, qPCR, IS-PCR, TRF, PCR-RFLP, LAMP, SD-PCR, Methylation Analysis.
Genotyping and Sequencing Service Providers
Academic and commercial centers offering genotyping and sequencing services.
"This is an excellent resource for anyone who is generally interested in how these technologies work"
Stephen Turner, PhD. Director, Bioinformatics Core, University of Virginia, USA. Getting Genetics Done Blog, 2009.
You can suggest additional topics or publications in my Feedback page.
In addition, you can visit BioSilicoList, my list of selected in silico tools for design and analyses of genetic and genomic experiments.
I have tried to include the links, if possible, to the freely available pdf files of the respective papers.
Created by: Diego Forero, MD, PhD