Data Acquisition & Storage
Workflows
Feedstocks to Fuels pipeline data storage and analysis
Here we provide a tutorial on how to import the feedstocks to fuels (F2F) pipeline data into EDD.
https://github.com/JBEI/F2Fanalysis
https://prezi.com/p/edit/jyw0lm0pkdrb/
Data Acquisition
Proteomics (work in progress)
Metabolomics (work in progress) Automated LCMS concentration analysis
Transcriptomics (work in progress)
Tools
Data Storage
The Experiment Data Depot (EDD) is an interactive online open-source tool that serves as a repository of experimental data.
Linked with ICE, EDD provides a standardized description of experiments: from the strains and plasmids involved, to the protocols used, the experimental design for sampling, and the data extracted.
You can see the tutorials to import, export and visualize data, and information to get an account here.
You can see the publication here.
Standards
For more information, please email ese-robotics@lbl.gov