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The sources of funds for the University are the General Appropriations Act better known as GAA and the tuition and miscellaneous fees known as STF. With the Free Higher Education Act, collection fees shifted from students to UNIFAST. The Finance Division has established mandatory and recurring operating expenses, chargeable to tuition fees. Priority projects are then identified in coordination with the Vice Presidents and the Physical Plant Development and Management (PPDM) and are included in the Five-Year BOR-approved Strategic Plan.
For Fiduciary and other fees, budget allocation is done by the end users and is based on past expenditure patterns. Other major activities which are calendared like Seniors AIM High program, RIPPLES (leadership training camp), Job fair, graduation ceremony, training and development, enrolment, intramurals, sports, and cultural fests, and enhancement programs for 4th-year prospective board takers are also financed.
The Bachelor of Science in Information Technology is under the Budget Allocation of the College of Fisheries and Criminology, where the program is offered at Binalbagan Campus.